RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 DEPDC5O75140 1603 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 A0A1B0GW15 77 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 A0A1W2PRD5 423 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 EFCAB10A6NFE3 127 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 C2orf74A8MZ97 194 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 TMEM114B3SHH9 223 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 PRAMEF26H0Y7S4 382 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 HAS3O00219 553 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 TOX3O15405 576 aaPredicted RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 ZSCAN12O43309 604 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 EMC8O43402 210 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 DEXIO95424 95 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ETHE1O95571 254 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 CST1P01037 141 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 DCNP07585 359 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 CTXN2P0C2S0 81 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 OR4E1P0C645 316 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 UBCP0CG48 685 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 CCDC166P0CW27 439 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 GIMD1P0DJR0 217 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 MYL2P10916 166 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ATP5A1P25705 553 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 STOMP27105 288 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 HSD11B1P28845 292 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 CRABP2P29373 138 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 GTF2H1P32780 548 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 UGT1A5P35504 534 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 UGT2B10P36537 528 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 CD79BP40259 229 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 SLC26A3P40879 764 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 RANBP1P43487 201 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 RPL29P47914 159 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 NPBWR2P48146 333 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 UCNP55089 124 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 GPX6P59796 221 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ADARB1P78563 741 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 CYP24A1Q07973 514 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 FLOT2Q14254 428 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ELAVL3Q14576 367 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 ATXN7L3Q14CW9 347 aaPredicted RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 NDUFA5Q16718 116 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 KYAT1Q16773 422 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 LRRC36Q1X8D7 754 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 LINC01620Q4KN68 170 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 OR2G6Q5TZ20 316 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ZNF691Q5VV52 312 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 STUMQ69YW2 141 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 CXCL17Q6UXB2 119 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 LRRC74BQ6ZQY2 392 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 RTL4Q6ZR62 310 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 LANCL3Q6ZV70 420 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 DPY19L4Q7Z388 723 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 PPP1R27Q86WC6 154 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 GID4Q8IVV7 300 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 TRAM1L1Q8N609 369 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 FAM86B1Q8N7N1 296 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 TTC29Q8NA56 475 aaPredicted RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 INO80EQ8NBZ0 244 aaPredicted RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 OR9G4Q8NGQ1 327 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 OR1L4Q8NGR5 311 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 OR2A12Q8NGT7 310 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 TRUB1Q8WWH5 349 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 ST8SIA1Q92185 356 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 FRAT1Q92837 279 aaPredicted RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 C8orf44Q96CB5 159 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 SDSLQ96GA7 329 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 C16orf74Q96GX8 76 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 SH3YL1Q96HL8 342 aaPredicted RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 CELF6Q96J87 481 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 OPALINQ96PE5 141 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ZIM3Q96PE6 472 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 CSPG4P5Q96PW8 444 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ZNF184Q99676 751 aaPredicted RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 TMEM246Q9BRR3 403 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 PARD6BQ9BYG5 372 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 NMUR2Q9GZQ4 415 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 FAM107BQ9H098 131 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 TOLLIPQ9H0E2 274 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 NARFLQ9H6Q4 476 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ANKRA2Q9H9E1 313 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 CAB39LQ9H9S4 337 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 C12orf4Q9NQ89 552 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 OR2S2Q9NQN1 319 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 SAMSN1Q9NSI8 373 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 CCDC59Q9P031 241 aaKnown RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 NYAP2Q9P242 653 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 UVRAGQ9P2Y5 699 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ZNF282Q9UDV7 671 aaPredicted RBP2.57□□□□□ -2
VPS13B-207ENST00000518569 PHF11Q9UIL8 331 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 CACNG2Q9Y698 323 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 SAR1BQ9Y6B6 198 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 RAB3GAP2Q9H2M9 1393 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 RGS12O14924 1447 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 PLCH2O75038 1416 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ZNF518AQ6AHZ1 1483 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 ABCC1P33527 1531 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 SAMD9Q5K651 1589 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 PREX2Q70Z35 1606 aa2.57□□□□□ -2
VPS13B-207ENST00000518569 CEP152O94986 1710 aa2.56□□□□□ -2
VPS13B-207ENST00000518569 UBR1Q8IWV7 1749 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms