RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 MRPL28Q13084 256 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 AIMP2Q13155 320 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 GGTLC2Q14390 218 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 QPRTQ15274 297 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 OR1Q1Q15612 314 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 TAB1Q15750 504 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 DUSP5Q16690 384 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 COL28A1Q2UY09 1125 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 KRTAP27-1Q3LI81 207 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SLC35D3Q5M8T2 416 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 EOGTQ5NDL2 527 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 DCST2Q5T1A1 773 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 OR2G6Q5TZ20 316 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 HBMQ6B0K9 141 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 PYHIN1Q6K0P9 492 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 NIPAL3Q6P499 406 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ARHGAP11AQ6P4F7 1023 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SMARCD3Q6STE5 483 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 PAQR6Q6TCH4 344 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 PLET1Q6UQ28 207 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ZNF836Q6ZNA1 936 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 TMEM91Q6ZNR0 172 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RTL4Q6ZR62 310 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 NRARPQ7Z6K4 114 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ABI3BPQ7Z7G0 1075 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 NOXA1Q86UR1 476 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 LRRC28Q86X40 367 aaPredicted RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 MARCH9Q86YJ5 346 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 PLCZ1Q86YW0 608 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ZNF440Q8IYI8 595 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 TCTE3Q8IZS6 198 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SYS1Q8N2H4 156 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 COX18Q8N8Q8 333 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 C19orf18Q8NEA5 215 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ATP6V1C2Q8NEY4 427 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 OR7G2Q8NG99 324 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 OR4E2Q8NGC2 313 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SPRYD4Q8WW59 207 aaPredicted RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 OR1E3Q8WZA6 343 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SLC7A6Q92536 515 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 CDS1Q92903 461 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RERGQ96A58 199 aaPredicted RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 MRPL38Q96DV4 380 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 MMABQ96EY8 250 aaPredicted RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 RRNAD1Q96FB5 475 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 SAMD8Q96LT4 415 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 MYADMQ96S97 322 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SECISBP2Q96T21 854 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 ATF6BQ99941 703 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 PELOQ9BRX2 385 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 TTYH2Q9BSA4 534 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 MARVELD1Q9BSK0 173 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 TMEM43Q9BTV4 400 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 LMF2Q9BU23 707 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 GON7Q9BXV9 100 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 GSDMCQ9BYG8 508 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SLC19A3Q9BZV2 496 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 UBQLN3Q9H347 655 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SLA2Q9H6Q3 261 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 EGLN3Q9H6Z9 239 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 NIPAL2Q9H841 368 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RNF121Q9H920 327 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 UCK1Q9HA47 277 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 C12orf10Q9HB07 376 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RANGRFQ9HD47 186 aaPredicted RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 ABCB9Q9NP78 766 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RPRD1BQ9NQG5 326 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 BABAM2Q9NXR7 383 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 PTTG3PQ9NZH4 202 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 MAT2BQ9NZL9 334 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ABRACLQ9P1F3 81 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 TBC1D29Q9UFV1 150 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 MOSPD1Q9UJG1 213 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ERRFI1Q9UJM3 462 aaPredicted RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 SLC7A7Q9UM01 511 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SIGLEC7Q9Y286 467 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 N6AMT1Q9Y5N5 214 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 PIAS3Q9Y6X2 628 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 TMEM131Q92545 1883 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 KIAA0100Q14667 2235 aaKnown RBP3.34□□□□□ -1.88
CAST-242ENST00000515063 NUP210LQ5VU65 1888 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 A0A0B4J2E0 115 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 A0A1B0GX12 115 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 DAPL1A0PJW8 107 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 OR5K3A6NET4 321 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GLOD5A6NK44 160 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 C12orf71A8MTZ7 269 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 FAM25AB3EWG3 89 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 FAM25CB3EWG5 89 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 FAM25GB3EWG6 89 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 B4DXG7 233 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NPIPB9F8W1W9 429 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 PRAMEF26H0Y7S4 382 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 H0YGG7 62 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 WWP2O00308 870 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 IMPA2O14732 288 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SLC31A1O15431 190 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 PLA2G10O15496 165 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 P2RX6O15547 441 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 LRRTM2O43300 516 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms