RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 ERLIN2O94905 339 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SLC2A10O95528 541 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 TDP2O95551 362 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 CATP04040 527 aaKnown RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SLC35E2BP0CK96 405 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 FOLR1P15328 257 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 PGAM1P18669 254 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 PRKACGP22612 351 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 ADORA2BP29275 332 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SHMT2P34897 504 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 EPHX2P34913 555 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 RPL29P47914 159 aaKnown RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 PRLHRP49683 370 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SERPINB8P50452 374 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 BLVRAP53004 296 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 CLDN6P56747 220 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 STX17P56962 302 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 MLF1P58340 268 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 UBE2KP61086 200 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SRPXP78539 464 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 CYCSP99999 105 aaKnown RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 C2orf80Q0P641 193 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 ORC2Q13416 577 aaPredicted RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SLC39A6Q13433 755 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 DMC1Q14565 340 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 MAD2L1BPQ15013 274 aaPredicted RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 BCL2A1Q16548 175 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 EXOC3L4Q17RC7 722 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 KCTD19Q17RG1 926 aaPredicted RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 C5orf64Q2M2E5 130 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 PAN3Q58A45 887 aaKnown RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 MFSD14CQ5VZR4 134 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 FAHD1Q6P587 224 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 TPGS1Q6ZTW0 290 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 LRRC6Q86X45 466 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 TMEM25Q86YD3 366 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 CBLN2Q8IUK8 224 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 C9orf40Q8IXQ3 194 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 C12orf56Q8IXR9 622 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 ABHD12Q8N2K0 398 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 OR6N2Q8NGY6 317 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 OR2G2Q8NGZ5 317 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 ZNF519Q8TB69 540 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 NDRG1Q92597 394 aaKnown RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 CDKL2Q92772 493 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 FAM122AQ96E09 287 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 CENPNQ96H22 339 aaPredicted RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SERPINB12Q96P63 405 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 RARRES2Q99969 163 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 C7orf50Q9BRJ6 194 aaKnown RBP1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SRRQ9GZT4 340 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SLC38A1Q9H2H9 487 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 PSTPIP2Q9H939 334 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 SIRT7Q9NRC8 400 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 CTPS2Q9NRF8 586 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 MAT2BQ9NZL9 334 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 PRODH2Q9UF12 536 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 CYB5R1Q9UHQ9 305 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 NAGKQ9UJ70 344 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 GNPTGQ9UJJ9 305 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 PSMD13Q9UNM6 376 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 AUP1Q9Y679 476 aa1.53□□□□□ -2.16
XRCC4-204ENST00000509268 MROH7Q68CQ1 1323 aa1.53□□□□□ -2.17
XRCC4-204ENST00000509268 IGHV4-30-2A0A087WSY4 118 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 IGHV1OR21-1A0A087WYE8 117 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 A0A0A6YYD5 115 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 A0A0G2JRQ6 117 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 ERVV-1B6SEH8 477 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 F8VP50 259 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 G3V3Y1 287 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 TOX3O15405 576 aaPredicted RBP1.52□□□□□ -2.17
XRCC4-204ENST00000509268 ERI3O43414 337 aaKnown RBP1.52□□□□□ -2.17
XRCC4-204ENST00000509268 AQP8O94778 261 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 LDOC1O95751 146 aaPredicted RBP1.52□□□□□ -2.17
XRCC4-204ENST00000509268 LSM8O95777 96 aaKnown RBP1.52□□□□□ -2.17
XRCC4-204ENST00000509268 LALBAP00709 142 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 SNRPCP09234 159 aaKnown RBP1.52□□□□□ -2.17
XRCC4-204ENST00000509268 ZNF250P15622 560 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 HLA-GP17693 338 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 IGHV1-2P23083 117 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 IL2RGP31785 369 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 KDELR2P33947 212 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 SPRP35270 261 aaPredicted RBP1.52□□□□□ -2.17
XRCC4-204ENST00000509268 HMGCLP35914 325 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 HCAR3P49019 387 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 KRTAP10-10P60014 251 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 SP4Q02446 784 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 SLC25A11Q02978 314 aaKnown RBP1.52□□□□□ -2.17
XRCC4-204ENST00000509268 TLE4Q04727 773 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 MADCAM1Q13477 382 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 TPBGQ13641 420 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 DGCR6Q14129 220 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 PON2Q15165 354 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 ZNF726P1Q15940 193 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 ATP6V1FQ16864 119 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 PARP15Q460N3 678 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 KLF17Q5JT82 389 aaPredicted RBP1.52□□□□□ -2.17
XRCC4-204ENST00000509268 ACTL10Q5JWF8 245 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 ACOT7LQ6ZUV0 252 aa1.52□□□□□ -2.17
XRCC4-204ENST00000509268 ABHD13Q7L211 337 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms