RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 OR3A2P47893 321 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 IDH3GP51553 393 aaPredicted RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 PAFAH1B2P68402 229 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 FAM3AP98173 230 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 ZNF85Q03923 595 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 TNFRSF9Q07011 255 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 SRSF9Q13242 221 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 GTF2H2Q13888 395 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 EIF2B1Q14232 305 aaKnown RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 GNMTQ14749 295 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 KIR2DS1Q14954 304 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 PON3Q15166 354 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 CD226Q15762 336 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 TMEM176BQ3YBM2 270 aaPredicted RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 CCDC153Q494R4 210 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 OR10J3Q5JRS4 329 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 LPCAT4Q643R3 524 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 FRMPD2BQ6IN97 320 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 TRNP1Q6NT89 227 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 GTF2H2CQ6P1K8 395 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 MED27Q6P2C8 311 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 CASP12Q6UXS9 341 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 ISCA2Q86U28 154 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 MYPOPQ86VE0 399 aaPredicted RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 ODF3L1Q8IXM7 274 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 RIMKLAQ8IXN7 391 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 BPIFB2Q8N4F0 458 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 WDR31Q8NA23 367 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 OR5L1Q8NGL2 311 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 OR11L1Q8NGX0 322 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 C11orf45Q8TAV5 145 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 SYNPRQ8TBG9 265 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 NDRG1Q92597 394 aaKnown RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 DYRK2Q92630 601 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 GTF3AQ92664 365 aaKnown RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 STMN2Q93045 179 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 TLCD1Q96CP7 247 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 DYNLL2Q96FJ2 89 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 NOL4LQ96MY1 436 aaPredicted RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 GPR22Q99680 433 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 TMEM204Q9BSN7 226 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 MRPS26Q9BYN8 205 aaKnown RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 ULBP1Q9BZM6 244 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 NAT10Q9H0A0 1025 aaKnown RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 MFSD1Q9H3U5 465 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 TMEM38AQ9H6F2 299 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 CAB39LQ9H9S4 337 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 RDH14Q9HBH5 336 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 UBE2TQ9NPD8 197 aaPredicted RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 FBXO8Q9NRD0 319 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 THUMPD1Q9NXG2 353 aaKnown RBP3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 VNN3Q9NY84 501 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 PRODH2Q9UF12 536 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 LGALS13Q9UHV8 139 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 MUTYHQ9UIF7 546 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 STK36Q9NRP7 1315 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 KIAA0232Q92628 1395 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 PLEKHH1Q9ULM0 1364 aa3.59□□□□□ -1.83
SMARCA5-202ENST00000508573 FRMPD3Q5JV73 1810 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 IGHV4-28A0A0C4DH34 117 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 A0A1W2PQ67 120 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 IFITM10A6NMD0 228 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 RNF212BA8MTL3 300 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 HACD1B0YJ81 288 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 E9PAM4 449 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 K7ERI5 159 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 CXCR6O00574 342 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 INPP4BO15327 924 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 BIRC5O15392 142 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 SPRY3O43610 288 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 NDUFA2O43678 99 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 FADS1O60427 444 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 CTSVO60911 334 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 GLSO94925 669 aaPredicted RBP3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 NDUFB8O95169 186 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 ATP6V1G2O95670 118 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 LSM8O95777 96 aaKnown RBP3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 WNT2P09544 360 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 ACSM4P0C7M7 580 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 LIMS3P0CW19 117 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 LIMS4P0CW20 117 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 C8orf88P0DMB2 117 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 IGFBP3P17936 291 aaPredicted RBP3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 EFNA1P20827 205 aaPredicted RBP3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 FUT3P21217 361 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 MT3P25713 68 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 FGF9P31371 208 aaPredicted RBP3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 SHMT2P34897 504 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 YAP1P46937 504 aaKnown RBP3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 AP2S1P53680 142 aaPredicted RBP3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 OR4D2P58180 307 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 HMGCS1Q01581 520 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 SEMG2Q02383 582 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 ACVR1Q04771 509 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 UNC119Q13432 240 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 EMC2Q15006 297 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 PSMD5Q16401 504 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 POU2AF1Q16633 256 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 FAM106AQ4KMX7 169 aa3.58□□□□□ -1.84
SMARCA5-202ENST00000508573 UNC50Q53HI1 259 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms