RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 MELKQ14680 651 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 PDCD1Q15116 288 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 ZMYND11Q15326 602 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 TAF9Q16594 264 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 DEFB112Q30KQ8 113 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 MTX3Q5HYI7 312 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 C10orf128Q5T292 105 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 FIP1L1Q6UN15 594 aaKnown RBP7.87□□□□□ -1.15
NEDD9-211ENST00000508546 BTNL3Q6UXE8 466 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 ZER1Q7Z7L7 766 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 KRT73Q86Y46 540 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 MUC20Q8N307 709 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-211ENST00000508546 LRRC18Q8N456 261 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 HIPK4Q8NE63 616 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 C10orf82Q8WW14 230 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 RAB40AQ8WXH6 277 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 MCHR2Q969V1 340 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 ZDHHC16Q969W1 377 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 THOC1Q96FV9 657 aaKnown RBP7.87□□□□□ -1.15
NEDD9-211ENST00000508546 SEPHS2Q99611 448 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 ARHGDIGQ99819 225 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 SSBP3Q9BWW4 388 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-211ENST00000508546 MRPL13Q9BYD1 178 aaKnown RBP7.87□□□□□ -1.15
NEDD9-211ENST00000508546 KCNN2Q9H2S1 579 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 NANOGQ9H9S0 305 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 SIAEQ9HAT2 523 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 MSL2Q9HCI7 577 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 NOX4Q9NPH5 578 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 NOTCH3Q9UM47 2321 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 IGHV2-70DA0A0C4DH43 119 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 C5orf49A4QMS7 147 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 PRORSD1PA6NEY8 169 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 SLC22A31A6NKX4 558 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 CEACAM18A8MTB9 384 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 CLIC1O00299 241 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 FMO6PO60774 539 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 SLC22A3O75751 556 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 IDO1P14902 403 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 TNFSF4P23510 183 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 GDI2P50395 445 aaKnown RBP7.86□□□□□ -1.15
NEDD9-211ENST00000508546 CLRN1P58418 232 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 MRPS34P82930 218 aaKnown RBP7.86□□□□□ -1.15
NEDD9-211ENST00000508546 HNRNPA0Q13151 305 aaKnown RBP7.86□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF74Q16587 644 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 C6orf10Q5SRN2 563 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 REEP3Q6NUK4 255 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF774Q6NX45 483 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF613Q6PF04 617 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 Q6YL49 198 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 RFPL4BQ6ZWI9 263 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 RANBP3LQ86VV4 465 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-211ENST00000508546 POU5F2Q8N7G0 328 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 OR10S1Q8NGN2 331 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF347Q96SE7 839 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 SLC30A2Q9BRI3 323 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 SIKE1Q9BRV8 207 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 CHIAQ9BZP6 476 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 PAIP1Q9H074 479 aaKnown RBP7.86□□□□□ -1.15
NEDD9-211ENST00000508546 ELOVL3Q9HB03 270 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 CCNB1IP1Q9NPC3 277 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 NANSQ9NR45 359 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 PNPOQ9NVS9 261 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 ZIM2Q9NZV7 527 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-211ENST00000508546 IL19Q9UHD0 177 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 RNF114Q9Y508 228 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 POMT1Q9Y6A1 747 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 USH1CQ9Y6N9 552 aa7.86□□□□□ -1.15
NEDD9-211ENST00000508546 COL7A1Q02388 2944 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 A0A0G2JND7 137 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 KIR2DS1A0A191URI9 304 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 TMEM178BH3BS89 294 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 IFNL4K9M1U5 179 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 CHP2O43745 196 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 TIMM8AO60220 97 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-211ENST00000508546 TSPAN15O95858 294 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 ASAH2BP0C7U1 165 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 KITP10721 976 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF32P17041 273 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 HOXB9P17482 250 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-211ENST00000508546 EPHA3P29320 983 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 PROK1P58294 105 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 CDK6Q00534 326 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 PSG4Q00888 419 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 PSG7Q13046 419 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 BEAN1Q3B7T3 259 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 C11orf87Q6NUJ2 197 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 BRD3OSQ6XYD6 125 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF620Q6ZNG0 422 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 HDDC2Q7Z4H3 204 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 NOXO1Q8NFA2 376 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 NFKBIDQ8NI38 313 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 VANGL1Q8TAA9 524 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-211ENST00000508546 ABHD4Q8TB40 342 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 GTF2H4Q92759 462 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 NABP1Q96AH0 204 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 PLEKHA8Q96JA3 519 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 FAM71F1Q96KD3 344 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-211ENST00000508546 WFDC6Q9BQY6 131 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms