RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 SRSF10O75494 262 aaKnown RBP10.11□□□□□ -0.79
NFKB1-205ENST00000505458 KRT33AO76009 404 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 ERCC1P07992 297 aaPredicted RBP10.11□□□□□ -0.79
NFKB1-205ENST00000505458 CD37P11049 281 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 HLA-DOBP13765 273 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 CASRP41180 1078 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 LSM6P62312 80 aaKnown RBP10.11□□□□□ -0.79
NFKB1-205ENST00000505458 FAM189A2Q15884 450 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 TMEM176BQ3YBM2 270 aaPredicted RBP10.11□□□□□ -0.79
NFKB1-205ENST00000505458 OR6M1Q8NGM8 313 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 FCAMRQ8WWV6 532 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 SLC7A6Q92536 515 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 OR2B2Q9GZK3 357 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 POLR1DQ9Y2S0 133 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 EFNA2O43921 213 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 SOX2P48431 317 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 DNASE1L1P49184 302 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 GRB2P62993 217 aaKnown RBP10.11□□□□□ -0.79
NFKB1-205ENST00000505458 RIPPLY1Q0D2K3 151 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 GPR176Q14439 515 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 HIST3H3Q16695 136 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 TMEM69Q5SWH9 247 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 HES5Q5TA89 166 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 OR7E24Q6IFN5 339 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 CMTM4Q8IZR5 234 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 OR6F1Q8NGZ6 308 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 ABHD1Q96SE0 405 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 AKIRIN1Q9H9L7 192 aaPredicted RBP10.11□□□□□ -0.79
NFKB1-205ENST00000505458 CYB5R1Q9UHQ9 305 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 LNP1A1A4G5 178 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 TFECO14948 347 aaPredicted RBP10.11□□□□□ -0.79
NFKB1-205ENST00000505458 TCN2P20062 427 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 IL11P20809 199 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 PDSS1Q5T2R2 415 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 LINGO2Q7L985 606 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 CDH26Q8IXH8 852 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 AMELYQ99218 206 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 MESP1Q9BRJ9 268 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 ING3Q9NXR8 418 aa10.11□□□□□ -0.79
NFKB1-205ENST00000505458 SPTBN5Q9NRC6 3674 aaKnown RBP10.11□□□□□ -0.79
NFKB1-205ENST00000505458 SSX4O60224 188 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 PRAF2O60831 178 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 PSMA6P60900 246 aaKnown RBP10.1□□□□□ -0.79
NFKB1-205ENST00000505458 PLA1AQ53H76 456 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 ELFN2Q5R3F8 820 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 C10orf128Q5T292 105 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 PRAMEF20Q5VT98 475 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 RAET1LQ5VY80 246 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 LRRC69Q6ZNQ3 347 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 SPATC1Q76KD6 591 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 SYNPRQ8TBG9 265 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 C11orf40Q8WZ69 217 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 SLAMF6Q96DU3 332 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 GFI1Q99684 422 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 MED29Q9NX70 200 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 OR5V1Q9UGF6 321 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 GTF2A1LQ9UNN4 478 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 LOC100289279A0A1B0GTE1 492 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 TMEM269A0A1B0GVZ9 245 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 CCL3P10147 92 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 AVPR2P30518 371 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 AGFG1P52594 562 aaKnown RBP10.1□□□□□ -0.79
NFKB1-205ENST00000505458 H3F3AP84243 136 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 TATDN3Q17R31 274 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 ZFP69Q49AA0 526 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 FCRLAQ7L513 359 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 TCTE3Q8IZS6 198 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 SPRY4Q9C004 299 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 MMP28Q9H239 520 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 NLKQ9UBE8 527 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 NUFIP1Q9UHK0 495 aaKnown RBP10.1□□□□□ -0.79
NFKB1-205ENST00000505458 BOKQ9UMX3 212 aaPredicted RBP10.1□□□□□ -0.79
NFKB1-205ENST00000505458 RCE1Q9Y256 329 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 NPIPA2E9PIF3 369 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 NPIPA3F8WFD2 350 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 AGRPO00253 132 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 SULT1C2O00338 296 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 ZNF806P0C7X5 589 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 OTX2P32243 289 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 CSNK1A1P48729 337 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 DBPQ10586 325 aaPredicted RBP10.1□□□□□ -0.79
NFKB1-205ENST00000505458 FOXL2NBQ6ZUU3 175 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 SLC25A38Q96DW6 304 aa10.1□□□□□ -0.79
NFKB1-205ENST00000505458 RBMX2Q9Y388 322 aaKnown RBP10.1□□□□□ -0.79
NFKB1-205ENST00000505458 XRCC3O43542 346 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 WISP1O95388 367 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 CD59P13987 128 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 IGFBP3P17936 291 aaPredicted RBP10.09□□□□□ -0.79
NFKB1-205ENST00000505458 ANKRD16Q6P6B7 361 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 KRT74Q7RTS7 529 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 ELMOD2Q8IZ81 293 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 OR13C3Q8NGS6 347 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 ASB5Q8WWX0 329 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 AKAP1Q92667 903 aaKnown RBP eCLIP10.09□□□□□ -0.79
NFKB1-205ENST00000505458 ATOH1Q92858 354 aaPredicted RBP10.09□□□□□ -0.79
NFKB1-205ENST00000505458 ZFP3Q96NJ6 502 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 OR2M2Q96R28 347 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 CCDC86Q9H6F5 360 aaKnown RBP10.09□□□□□ -0.79
NFKB1-205ENST00000505458 TMEM9BQ9NQ34 198 aa10.09□□□□□ -0.79
NFKB1-205ENST00000505458 PTTG3PQ9NZH4 202 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms