RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SLCO4A1Q96BD0 722 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 CXorf40BQ96DE9 158 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 SMIM8Q96KF7 97 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 OR5B12Q96R08 314 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 IL4I1Q96RQ9 567 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 RAB11FIP5Q9BXF6 653 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 MS4A8Q9BY19 250 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 NMNAT2Q9BZQ4 307 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 C20orf85Q9H1P6 137 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 CST9LQ9H4G1 147 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 MANSC1Q9H8J5 431 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 HEXA-AS1Q9H8Q6 139 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 SYNPO2LQ9H987 977 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 LMAN1LQ9HAT1 526 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 SEMA4GQ9NTN9 838 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 ABHD10Q9NUJ1 306 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 TAS2R14Q9NYV8 317 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 VPS29Q9UBQ0 182 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC9A2Q9UBY0 812 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 SAMD4AQ9UPU9 718 aaKnown RBP2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC35A3Q9Y2D2 325 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 RNF11Q9Y3C5 154 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 OR10H1Q9Y4A9 318 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 CDH10Q9Y6N8 788 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 ADCY10Q96PN6 1610 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 TSPOAP1O95153 1857 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 URB2Q14146 1524 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ARHGEF40Q8TER5 1519 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PPIAL4EA0A075B759 164 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PPIAL4CA0A0B4J2A2 164 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PNMA8CA0A1B0GUJ8 204 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 A0A1W2PR77 199 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 IGSF23A1L1A6 192 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM218A2RU14 115 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 D6RAR5 112 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 E9PLN8 166 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PPIAL4DF5H284 164 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 CLDN34H7C241 214 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 M0QYG6 137 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC17A3O00476 420 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 NDUFS4O43181 175 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ORC5O43913 435 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 AGFG2O95081 481 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TOMM40O96008 361 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MT-ND4P03905 459 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PPIAL4FP0DN26 164 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 FUT3P21217 361 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 HRH2P25021 359 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ITPKBP27987 946 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 DUSP1P28562 367 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 SRD5A2P31213 254 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PRDX2P32119 198 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 DUSP3P51452 185 aaPredicted RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 CRISP1P54107 249 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 DLK1P80370 383 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 FKBP3Q00688 224 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ID2Q02363 134 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ACSM2AQ08AH3 577 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 FOXI1Q12951 378 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MLLT11Q13015 90 aaPredicted RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 CLINT1Q14677 625 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PEA15Q15121 130 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 NPY5RQ15761 445 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 WDR25Q64LD2 544 aaPredicted RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ACSM2BQ68CK6 577 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 GLYATQ6IB77 296 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PRR27Q6MZM9 219 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 FAM180AQ6UWF9 173 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 SIGLEC15Q6ZMC9 328 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC36A1Q7Z2H8 476 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PIGZQ86VD9 579 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 UEVLDQ8IX04 471 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF683Q8IZ20 524 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PNLDC1Q8NA58 520 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 RPLP0P6Q8NHW5 317 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 RNASEH2CQ8TDP1 164 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 IGSF8Q969P0 613 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TADA1Q96BN2 335 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ROPN1LQ96C74 230 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 RCN3Q96D15 328 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MRPS24Q96EL2 167 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 COQ2Q96H96 371 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 C12orf42Q96LP6 360 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF75AQ96N20 296 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ACCSQ96QU6 501 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 RBP7Q96R05 134 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 OR2M4Q96R27 311 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 VKORC1Q9BQB6 163 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 SULT4A1Q9BR01 284 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 CHRNA10Q9GZZ6 450 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM27Q9HBJ8 222 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 JPT1Q9UK76 154 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 VPREB3Q9UKI3 123 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 RNF6Q9Y252 685 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MYH4Q9Y623 1939 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 NSD3Q9BZ95 1437 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 IQGAP2Q13576 1575 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 KIF1BO60333 1816 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TRAV8-7A0A075B6U6 113 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 LOC105371242A0A075B767 164 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms