RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 NKPD1Q17RQ9 610 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 PAQR4Q8N4S7 273 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-211ENST00000494800 CPEB3Q8NE35 698 aaKnown RBP15.18■□□□□ 0.02
HDAC4-211ENST00000494800 OR52L1Q8NGH7 329 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 AKR7LQ8NHP1 331 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 SYNPRQ8TBG9 265 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 SNX33Q8WV41 574 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 GPA33Q99795 319 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 ZNF416Q9BWM5 594 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 OR51B6Q9H340 312 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 SLCO1C1Q9NYB5 712 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 LYVE1Q9Y5Y7 322 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 ARPC3O15145 178 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 IDH3BO43837 385 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 MT-ND5P03915 603 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 RAP2AP10114 183 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 DAOP14920 347 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 CTLA4P16410 223 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 GSSP48637 474 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 FXYD6P3P58550 94 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 MS4A2Q01362 244 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 LOXL1Q08397 574 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-211ENST00000494800 PGBD2Q6P3X8 592 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 PGM2L1Q6PCE3 622 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 OR1J1Q8NGS3 322 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 POM121L2Q96KW2 1035 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 FZR1Q9UM11 496 aa15.17■□□□□ 0.02
HDAC4-211ENST00000494800 UBOX5O94941 541 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 USF1P22415 310 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-211ENST00000494800 GCH1P30793 250 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 CENPAP49450 140 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 ARHGDIAP52565 204 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 LSM6P62312 80 aaKnown RBP15.16■□□□□ 0.02
HDAC4-211ENST00000494800 AQP6Q13520 282 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 ENDOGQ14249 297 aaKnown RBP15.16■□□□□ 0.02
HDAC4-211ENST00000494800 GK3PQ14409 553 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 OR2T5Q6IEZ7 315 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 LEG1Q6P5S2 330 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 ZNF620Q6ZNG0 422 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 OR2T29Q8NH02 315 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 CLPTM1LQ96KA5 538 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 SAMD8Q96LT4 415 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 SNX18Q96RF0 628 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 NUAK2Q9H093 628 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 WNT5BQ9H1J7 359 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 TPK1Q9H3S4 243 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 ELOVL3Q9HB03 270 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 EMC7Q9NPA0 242 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 COA3Q9Y2R0 106 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-211ENST00000494800 POLR1DQ9Y2S0 133 aa15.16■□□□□ 0.02
HDAC4-211ENST00000494800 SAMHD1Q9Y3Z3 626 aaKnown RBP15.16■□□□□ 0.02
HDAC4-211ENST00000494800 AQP12BA6NM10 295 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 TLX2O43763 284 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-211ENST00000494800 DOK2O60496 412 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 COX5BP10606 129 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 ZNF250P15622 560 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 GSTM3P21266 225 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 CDKN2AP42771 156 aaKnown RBP15.15■□□□□ 0.02
HDAC4-211ENST00000494800 ALDH3B1P43353 468 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 ZNF718Q3SXZ3 478 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 ZNF774Q6NX45 483 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 PTCHD4Q6ZW05 846 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 LRP11Q86VZ4 500 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 AQP12AQ8IXF9 295 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 ZCCHC24Q8N2G6 241 aaKnown RBP15.15■□□□□ 0.02
HDAC4-211ENST00000494800 OR9Q2Q8NGE9 314 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 UBASH3BQ8TF42 649 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 FOXN4Q96NZ1 517 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 TAAR3PQ9P1P4 343 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 CDH10Q9Y6N8 788 aa15.15■□□□□ 0.02
HDAC4-211ENST00000494800 LOC100509620A0A075B734 347 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 GNGT2O14610 69 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 SGCEO43556 437 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 CD5LO43866 347 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 NR4A2P43354 598 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 HTR5AP47898 357 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 GLO1Q04760 184 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 GGTLC2Q14390 218 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 MSMPQ1L6U9 139 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 MICAQ29983 383 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 TMEM154Q6P9G4 183 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 UGT2A3Q6UWM9 527 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 ZNF786Q8N393 782 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 AQP11Q8NBQ7 271 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 OR4C15Q8NGM1 316 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 OR4K13Q8NH42 304 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 ABHD4Q8TB40 342 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 POM121Q96HA1 1249 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 NMNAT3Q96T66 252 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 BTBD10Q9BSF8 475 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 YY1AP1Q9H869 796 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 PLEK2Q9NYT0 353 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 ASH2LQ9UBL3 628 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 U3KQV3 271 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 NF1P21359 2839 aa15.14■□□□□ 0.01
HDAC4-211ENST00000494800 SETD2Q9BYW2 2564 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-211ENST00000494800 IGLV3-9A0A075B6K5 115 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 DHRS12A0PJE2 317 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 H3BSA7 217 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 ACOT8O14734 319 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms