RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 HLA-HP01893 362 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ABOP16442 354 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF17P17021 662 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 EVI2BP34910 448 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC1A1P43005 524 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 QARSP47897 775 aaKnown RBP3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 CDC34P49427 236 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 VGLL4Q14135 290 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 BCL2A1Q16548 175 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 CDKL4Q5MAI5 379 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 SAMD4BQ5PRF9 694 aaKnown RBP3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 C1orf220Q5T0J3 134 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 C1orf146Q5VVC0 180 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 PLEKHG7Q6ZR37 379 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ACOT7LQ6ZUV0 252 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 APRG1Q8IVJ8 170 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ENTHD1Q8IYW4 607 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 SVOPLQ8N434 492 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 C20orf203Q8NBC4 194 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR4D9Q8NGE8 314 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF461Q8TAF7 563 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 NEIL3Q8TAT5 605 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ACOT11Q8WXI4 607 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ING5Q8WYH8 240 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 RNF170Q96K19 258 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC35E1Q96K37 410 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF285Q96NJ3 590 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 NRTNQ99748 197 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ATP5SQ99766 215 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC35A5Q9BS91 424 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 PIGUQ9H490 435 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 NIPAL2Q9H841 368 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC25A22Q9H936 323 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ANKHQ9HCJ1 492 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR2S2Q9NQN1 319 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 AIG1Q9NVV5 245 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 KIF25Q9UIL4 384 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ASF1AQ9Y294 204 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 PUS1Q9Y606 427 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 SAR1BQ9Y6B6 198 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZCCHC6Q5VYS8 1495 aaKnown RBP3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 PRSS37A4D1T9 235 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 GOLGA8IPA6NC78 632 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 RNASEK-C17orf49H0YIS7 233 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZBTB5O15062 677 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 XRCC2O43543 280 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 GMDSO60547 372 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC19A2O60779 497 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 PFKFB2O60825 505 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF780AO75290 641 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR5F1O95221 314 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 VAPBO95292 243 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 FADS2O95864 444 aaKnown RBP3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 HOXC4P09017 264 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 ATP6V1B2P21281 511 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 CCNE1P24864 410 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 UGT2B10P36537 528 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 P2RY2P41231 377 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 MAP3K8P41279 467 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 GPR1P46091 355 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 TMED10P49755 219 aaKnown RBP3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 DAP3P51398 398 aaKnown RBP3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 HSPA2P54652 639 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 BIDP55957 195 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 PRPS1P60891 318 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 SELENOTP62341 195 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 DR1Q01658 176 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF33AQ06730 810 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 FADDQ13158 208 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 RGS21Q2M5E4 152 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 PPM1LQ5SGD2 360 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 SAPCD1Q5SSQ6 148 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF691Q5VV52 312 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 TMPRSS11AQ6ZMR5 421 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 FAM122BQ7Z309 247 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 IQCKQ8N0W5 287 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 TRAM1L1Q8N609 369 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 CYB561A3Q8NBI2 242 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR5T1Q8NG75 326 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR56B4Q8NH76 319 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 NUBPLQ8TB37 319 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 UBA3Q8TBC4 463 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 TMEM239Q8WW34 195 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 ISOC2Q96AB3 205 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 APH1AQ96BI3 265 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 CPB2Q96IY4 423 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 KLHDC3Q9BQ90 382 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 CHID1Q9BWS9 393 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 OSBPL10Q9BXB5 764 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 MAP1LC3CQ9BXW4 147 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 UCK2Q9BZX2 261 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR51M1Q9H341 326 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 CD209Q9NNX6 404 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 SAMSN1Q9NSI8 373 aaKnown RBP3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 TMCO1Q9UM00 188 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 COPS3Q9UNS2 423 aa3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 LRPPRCP42704 1394 aaKnown RBP3.22□□□□□ -1.89
HMGB1P38-201ENST00000490557 NSG1A0A0A6YYJ2 146 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 VSTM2BA6NLU5 285 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 TOM1O60784 492 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms