RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 GLS2Q9UI32 602 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PDCD11Q14690 1871 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 A0A0G2JMP0 313 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 A0A0X1KG70 313 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PNMA8CA0A1B0GUJ8 204 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 OR6C70A6NIJ9 312 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF487B1APH4 448 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SUPT3HB4E1H0 165 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 F8VP50 259 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 LAD1O00515 517 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SGCEO43556 437 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 KIAA0513O60268 411 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 NDUFS6O75380 124 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 KCNK2O95069 426 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 HPNP05981 417 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 GLAP06280 429 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 COX4I1P13073 169 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TNNI1P19237 187 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 MEOX2P50222 304 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 HLCSP50747 726 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 FUT6P51993 359 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 RPL27P61353 136 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 RPL10AP62906 217 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 FKBP3Q00688 224 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ANGPT1Q15389 498 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 LGSNQ5TDP6 509 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SMIM5Q71RC9 77 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 EIF3MQ7L2H7 374 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 FCRLAQ7L513 359 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PAGE2Q7Z2X7 111 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PACRGLQ8N7B6 248 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PNLDC1Q8NA58 520 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SLC37A3Q8NCC5 494 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF680Q8NEM1 530 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 OR4D10Q8NGI6 311 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 OR6Q1Q8NGQ2 317 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SYNPRQ8TBG9 265 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZFAND1Q8TCF1 268 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 UFD1Q92890 307 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TCEAL3Q969E4 200 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 FAM104AQ969W3 186 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 MAP1LC3CQ9BXW4 147 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 RAB34Q9BZG1 259 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TAS2R9Q9NYW1 312 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 THYN1Q9P016 225 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ALG6Q9Y672 507 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 CSNK1G3Q9Y6M4 447 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 MN1Q10571 1320 aaPredicted RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 RALGAPA2Q2PPJ7 1873 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TANC1Q9C0D5 1861 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 IGKV6D-41A0A0C4DH26 115 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TRIM49D1C9J1S8 452 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TFECO14948 347 aaPredicted RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 KLRC4O43908 158 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 LDOC1O95751 146 aaPredicted RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF26P17031 533 aaPredicted RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 NUP62P37198 522 aaPredicted RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PSMD4P55036 377 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PKNOX1P55347 436 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 IFITM3Q01628 133 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PAX2Q02962 417 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 CARD16Q5EG05 197 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TIGD3Q6B0B8 471 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 STEAP1BQ6NZ63 245 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF841Q6ZN19 808 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 FOXL2NBQ6ZUU3 175 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SLC35D2Q76EJ3 337 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 C16orf82Q7Z2V1 217 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 UBQLNLQ8IYU4 475 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 CLEC4FQ8N1N0 589 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 OR2T11Q8NH01 316 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 RNASE11Q8TAA1 199 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 IL1F10Q8WWZ1 152 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 YIPF5Q969M3 257 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 C18orf25Q96B23 403 aaPredicted RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZHX1-C8orf76Q96EF9 292 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TNFRSF13CQ96RJ3 184 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 IL4I1Q96RQ9 567 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PELOQ9BRX2 385 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TEKT3Q9BXF9 490 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 DGCR6LQ9BY27 220 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PRRG3Q9BZD7 231 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SLC19A3Q9BZV2 496 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ROGDIQ9GZN7 287 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SYT4Q9H2B2 425 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 LRRC19Q9H756 370 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SYNDIG1Q9H7V2 258 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 FBXO8Q9NRD0 319 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PLLPQ9Y342 182 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 HSPB11Q9Y547 144 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 A0A1W2PPR1 153 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 LINC00862A6NCI5 91 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 OR5H15A6NDH6 313 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 ARGFXA6NJG6 315 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 H7C2Y5 167 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 IL6P05231 212 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 MBL2P11226 248 aaPredicted RBP2.4□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF250P15622 560 aa2.4□□□□□ -2.02
UBXN4-208ENST00000490163 TCN1P20061 433 aaPredicted RBP2.4□□□□□ -2.02
UBXN4-208ENST00000490163 UGT2B10P36537 528 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms