RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 MREGQ8N565 214 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 ARRDC1Q8N5I2 433 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 TTC29Q8NA56 475 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 NOXO1Q8NFA2 376 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 OR6F1Q8NGZ6 308 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 FNDC8Q8TC99 324 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 SLC7A13Q8TCU3 470 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 ST6GAL2Q96JF0 529 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 OR5B12Q96R08 314 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 OR5B2Q96R09 309 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 FAM173AQ9BQD7 235 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 SLC35A5Q9BS91 424 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 MED10Q9BTT4 135 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 TM2D1Q9BX74 207 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 RBKSQ9H477 322 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PIGUQ9H490 435 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 LRRC19Q9H756 370 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 NHEJ1Q9H9Q4 299 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 WDR41Q9HAD4 459 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PLEKHA1Q9HB21 404 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 RMND1Q9NWS8 449 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 CYB5R1Q9UHQ9 305 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 NAGKQ9UJ70 344 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 MRPS28Q9Y2Q9 187 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 FBXO7Q9Y3I1 522 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 LRRC42Q9Y546 428 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 ARAP2Q8WZ64 1704 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 RFX7Q2KHR2 1363 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 MYH13Q9UKX3 1938 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 IGKV1D-8A0A087WSZ0 117 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PSMB11A5LHX3 300 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PMS2P5A8MQ11 134 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 IDSB3KWA1 339 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 RNASEK-C17orf49H0YIS7 233 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PLPP1O14494 284 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 TOX3O15405 576 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 PRKNO60260 465 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 CDC123O75794 336 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 TBX6O95947 436 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 SERPINA5P05154 406 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 DCNP07585 359 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 TRIM49P0CI25 452 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 TRIM49CP0CI26 452 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 RBMY1CP0DJD4 496 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 CD1DP15813 335 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 GABRG2P18507 467 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 GPR183P32249 361 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 CSKP41240 450 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 SLC1A1P43005 524 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 BIDP55957 195 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 KRTAP10-1P60331 282 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 DYNLL1P63167 89 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 C2orf80Q0P641 193 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 DMC1Q14565 340 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 MAD2L1BPQ15013 274 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 FCN2Q15485 313 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 VAMP3Q15836 100 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 ACER2Q5QJU3 275 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 OR52E8Q6IFG1 317 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PRMT9Q6P2P2 845 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 REG3GQ6UW15 175 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 FRRS1Q6ZNA5 592 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 Q6ZRP5 223 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 NUFIP2Q7Z417 695 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 RALGPS2Q86X27 583 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 NUDCD3Q8IVD9 361 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 FUNDC1Q8IVP5 155 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 ZNF547Q8IVP9 402 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 CDKL3Q8IVW4 592 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 FBXO16Q8IX29 292 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 PIANPQ8IYJ0 282 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PRR22Q8IZ63 422 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 C15orf54Q8N8G6 183 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PRELID2Q8N945 189 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 OR2L2Q8NH16 312 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 OR56B4Q8NH76 319 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 LGALS14Q8TCE9 139 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 GPR151Q8TDV0 419 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 SSC4DQ8WTU2 575 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 CCDC124Q96CT7 223 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 ECHDC3Q96DC8 303 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 JSRP1Q96MG2 331 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 SERPINB11Q96P15 392 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 F2RL3Q96RI0 385 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 NKX3-1Q99801 234 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 TMEM59Q9BXS4 323 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 DEFB129Q9H1M3 183 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 BOLA2Q9H3K6 86 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 RNF41Q9H4P4 317 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 NTN4Q9HB63 628 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 EML4Q9HC35 981 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 MAT2BQ9NZL9 334 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 SLC2A6Q9UGQ3 507 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 RIMS3Q9UJD0 308 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 ZNF256Q9Y2P7 627 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 V9GYY9 64 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 FRMPD3Q5JV73 1810 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 A0A1B0GU03 582 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 OR5B21A6NL26 309 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ZNF705EA8MWA4 302 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms