RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 WNT5BQ9H1J7 359 aa13.5□□□□□ -0.25
USP48-210ENST00000489108 POFUT1Q9H488 388 aa13.5□□□□□ -0.25
USP48-210ENST00000489108 IL19Q9UHD0 177 aa13.5□□□□□ -0.25
USP48-210ENST00000489108 SLC13A4Q9UKG4 626 aa13.5□□□□□ -0.25
USP48-210ENST00000489108 UGT2A1Q9Y4X1 527 aa13.5□□□□□ -0.25
USP48-210ENST00000489108 POMT1Q9Y6A1 747 aa13.5□□□□□ -0.25
USP48-210ENST00000489108 IGKV1D-43A0A0B4J1Z2 117 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 C3orf80F5H4A9 247 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 BLOC1S5-TXNDC5H3BN57 136 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 PIN1P1O15428 100 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 F13BP05160 661 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 ASAH2BP0C7U1 165 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 ACADSP16219 412 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 CPT2P23786 658 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 POLR2JP52435 117 aaKnown RBP13.49□□□□□ -0.25
USP48-210ENST00000489108 ARHGDIAP52565 204 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 IFFO1Q0D2I5 559 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 TAF11Q15544 211 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 RUNDC3AQ59EK9 446 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 NXNQ6DKJ4 435 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 SLC27A4Q6P1M0 643 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 ZNF613Q6PF04 617 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 TTC33Q6PID6 262 aaPredicted RBP13.49□□□□□ -0.25
USP48-210ENST00000489108 MSANTD1Q6ZTZ1 278 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 RANBP3LQ86VV4 465 aaPredicted RBP13.49□□□□□ -0.25
USP48-210ENST00000489108 FITM2Q8N6M3 262 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 DYRK2Q92630 601 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 PLEKHA8Q96JA3 519 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 OR2V2Q96R30 315 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 ZNF607Q96SK3 696 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 OR2H1Q9GZK4 316 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 ELOVL3Q9HB03 270 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 GCM1Q9NP62 436 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 SLCO1B3Q9NPD5 702 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 MAN2C1Q9NTJ4 1040 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 MIOXQ9UGB7 285 aa13.49□□□□□ -0.25
USP48-210ENST00000489108 H0YL77 283 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 M0R3H8 397 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 KPNA4O00629 521 aaPredicted RBP13.48□□□□□ -0.25
USP48-210ENST00000489108 CHP2O43745 196 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 GPR137BO60478 399 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 ICMTO60725 284 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 LYPD3O95274 346 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 THY1P04216 161 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 UMPSP11172 480 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 IDO1P14902 403 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 MMP16P51512 607 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 RPL15P61313 204 aaKnown RBP13.48□□□□□ -0.25
USP48-210ENST00000489108 TTMPQ5BVD1 217 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 GCNT6Q5T4J0 391 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 SLC2A7Q6PXP3 512 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 ALDH16A1Q8IZ83 802 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 OR9I1Q8NGQ6 314 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 ZNF420Q8TAQ5 688 aaPredicted RBP13.48□□□□□ -0.25
USP48-210ENST00000489108 ASB10Q8WXI3 467 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 NSMAFQ92636 917 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 NEIL1Q96FI4 390 aaPredicted RBP13.48□□□□□ -0.25
USP48-210ENST00000489108 TMEM246Q9BRR3 403 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 ROPN1BQ9BZX4 212 aaPredicted RBP13.48□□□□□ -0.25
USP48-210ENST00000489108 ROPN1Q9HAT0 212 aaPredicted RBP13.48□□□□□ -0.25
USP48-210ENST00000489108 ZIM2Q9NZV7 527 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 ZNF229Q9UJW7 825 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 RYR3Q15413 4870 aa13.48□□□□□ -0.25
USP48-210ENST00000489108 A0A1W2PRG6 482 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 PRORSD1PA6NEY8 169 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 CPSF4LA6NMK7 179 aaKnown RBP13.47□□□□□ -0.25
USP48-210ENST00000489108 CENPBD1B2RD01 187 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 MCIDASD6RGH6 385 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 TNFRSF13BO14836 293 aaPredicted RBP13.47□□□□□ -0.25
USP48-210ENST00000489108 SURF4O15260 269 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 PLXNB1O43157 2135 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 FMO6PO60774 539 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 CYB5R3P00387 301 aaPredicted RBP13.47□□□□□ -0.25
USP48-210ENST00000489108 HOXB9P17482 250 aaPredicted RBP13.47□□□□□ -0.25
USP48-210ENST00000489108 AQP1P29972 269 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 UGT2B15P54855 530 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 FMODQ06828 376 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 BST1Q10588 318 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 FAM189A2Q15884 450 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 C2orf68Q2NKX9 166 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 FAM27BQ5VT28 67 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 NANOGNBQ7Z5D8 188 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 ARMC8Q8IUR7 673 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 TBC1D15Q8TC07 691 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 SSMEM1Q8WWF3 244 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 NMD3Q96D46 503 aaKnown RBP13.47□□□□□ -0.25
USP48-210ENST00000489108 CMBLQ96DG6 245 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 PCGF1Q9BSM1 259 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 CDADC1Q9BWV3 514 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 SLC25A37Q9NYZ2 338 aa13.47□□□□□ -0.25
USP48-210ENST00000489108 C5orf63A6NC05 138 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 HDAC3O15379 428 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 SERPINB7O75635 380 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 CSF1P09603 554 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 GSTM3P21266 225 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 KITLGP21583 273 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 LAP3P28838 519 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 PCBP3P57721 371 aaKnown RBP13.46□□□□□ -0.25
USP48-210ENST00000489108 RPL18Q07020 188 aaKnown RBP13.46□□□□□ -0.25
USP48-210ENST00000489108 SCARB2Q14108 478 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms