RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 SERINC1Q9NRX5 453 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 SLC23A1Q9UHI7 598 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 POLHQ9Y253 713 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 RPH3AQ9Y2J0 694 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-230ENST00000488543 FREM3P0C091 2139 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 TVP23AA6NH52 213 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 FABP7O15540 132 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 ORC5O43913 435 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 TRIM3O75382 744 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-230ENST00000488543 NEURL1O76050 574 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 ALX3O95076 343 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 AKR7A3O95154 331 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 GPANK1O95872 356 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 GAAP10253 952 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 EIF1P41567 113 aaKnown RBP10.86□□□□□ -0.67
HDAC6-230ENST00000488543 P2RY4P51582 365 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 ZNF684Q5T5D7 378 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 TIGD3Q6B0B8 471 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 HBMQ6B0K9 141 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 DMKNQ6E0U4 476 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-230ENST00000488543 ABHD4Q8TB40 342 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 RFT1Q96AA3 541 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 PELI1Q96FA3 418 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 ZC3HAV1LQ96H79 300 aaKnown RBP10.86□□□□□ -0.67
HDAC6-230ENST00000488543 TEKT2Q9UIF3 430 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 B9D1Q9UPM9 204 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 IGLV1-36A0A0B4J1U3 117 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 A0A1W2PNV4 684 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 SLC22A23A1A5C7 686 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 PINLYPA6NC86 204 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 NPIPB13A6NJU9 1138 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 NPIPB4C9JG80 1138 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 H3BSH0 61 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 XKRYO14609 159 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 PLPP2O43688 288 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 ZIC3O60481 467 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 ADRB1P08588 477 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 RFPL3SP0C7P2 107 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 DPP4P27487 766 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 PSMB10P40306 273 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 RFC3P40938 356 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 ACTA2P62736 377 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 ACTG2P63267 376 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 HSF2Q03933 536 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 TLE3Q04726 772 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 DEFB109BQ30KR1 87 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 KRT77Q7Z794 578 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 CDC20BQ86Y33 519 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 OR11H7Q8NGC8 314 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 THAP4Q8WY91 577 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 RNF166Q96A37 237 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-230ENST00000488543 PGLYRP3Q96LB9 341 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 COQ7Q99807 217 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 TMUB1Q9BVT8 246 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 CYSLTR2Q9NS75 346 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 B3GAT1Q9P2W7 334 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 ZNF222Q9UK12 451 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 FKBP7Q9Y680 259 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 A0A1W2PNR3 127 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 OGG1O15527 345 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 SLC19A2O60779 497 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 SLC43A1O75387 559 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 C1QBP02746 253 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 MT-ND4P03905 459 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 P04436 131 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 CXCL3P19876 107 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 GALP22466 123 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 CAPZA2P47755 286 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 MTNR1BP49286 362 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 DSCR4P56555 118 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-230ENST00000488543 TAS2R43P59537 309 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 ADPRHL1Q8NDY3 354 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 OR1J4Q8NGS1 313 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 SLC25A43Q8WUT9 341 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-230ENST00000488543 AKAP1Q92667 903 aaKnown RBP eCLIP10.85□□□□□ -0.67
HDAC6-230ENST00000488543 GHSRQ92847 366 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 ZNF552Q9H707 407 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-230ENST00000488543 AUNIPQ9H7T9 357 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 B3GALT5Q9Y2C3 310 aa10.85□□□□□ -0.67
HDAC6-230ENST00000488543 ANKRD11Q6UB99 2663 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-230ENST00000488543 NCOR2Q9Y618 2525 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 CENPBD1B2RD01 187 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 ZNF814B7Z6K7 855 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 IFNGR1P15260 489 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 CTLA4P16410 223 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 ATF1P18846 271 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 ERP29P30040 261 aaKnown RBP10.84□□□□□ -0.67
HDAC6-230ENST00000488543 SLC6A1P30531 599 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 HSF1Q00613 529 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 OR1C1Q15619 314 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 ACSM3Q53FZ2 586 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 PLA1AQ53H76 456 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 FDCSPQ8NFU4 85 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 KCNE4Q8WWG9 221 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 DACT3Q96B18 629 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-230ENST00000488543 OR5B2Q96R09 309 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 UTP23Q9BRU9 249 aaKnown RBP10.84□□□□□ -0.67
HDAC6-230ENST00000488543 SLC25A18Q9H1K4 315 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 WDR76Q9H967 626 aa10.84□□□□□ -0.67
HDAC6-230ENST00000488543 ING3Q9NXR8 418 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms