RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ZNF23P17027 643 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 RRM2P31350 389 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 GZMKP49863 264 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 SELENOVP59797 346 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 SMARCD3Q6STE5 483 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 UGT2A3Q6UWM9 527 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 CYP2R1Q6VVX0 501 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 RFPL4BQ6ZWI9 263 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 ADCK1Q86TW2 530 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 ZDHHC21Q8IVQ6 265 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 CCDC197Q8NCU1 140 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 C11orf40Q8WZ69 217 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 RERGLQ9H628 205 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 IL1RAPQ9NPH3 570 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 TAAR3PQ9P1P4 343 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 TIMM10BQ9Y5J6 103 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 IER3IP1Q9Y5U9 82 aa15.2■□□□□ 0.02
ITGB1-215ENST00000488494 CHD3Q12873 2000 aaKnown RBP15.19■□□□□ 0.02
ITGB1-215ENST00000488494 IGLV3-9A0A075B6K5 115 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 LRP5LA4QPB2 252 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 IMPA2O14732 288 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 AHCYL1O43865 530 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 OR10H3O60404 316 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 SLC16A7O60669 478 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 PPP1R3DO95685 299 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 HPXP02790 462 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 FPR3P25089 353 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 RPS6KA3P51812 740 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 RIN1Q13671 783 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 ELFN2Q5R3F8 820 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 OTPQ5XKR4 325 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 DPY19L2P2Q6ZN68 376 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 PTCHD4Q6ZW05 846 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 ZER1Q7Z7L7 766 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 SNX33Q8WV41 574 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 GTF3AQ92664 365 aaKnown RBP15.19■□□□□ 0.02
ITGB1-215ENST00000488494 SNX18Q96RF0 628 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 VSX1Q9NZR4 365 aaPredicted RBP15.19■□□□□ 0.02
ITGB1-215ENST00000488494 EIF3KQ9UBQ5 218 aaKnown RBP15.19■□□□□ 0.02
ITGB1-215ENST00000488494 GPR160Q9UJ42 338 aa15.19■□□□□ 0.02
ITGB1-215ENST00000488494 B2RBV5 119 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 DOK2O60496 412 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 CHN2P52757 468 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 TRIP10Q15642 601 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 HIPK1Q86Z02 1210 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 ALDH16A1Q8IZ83 802 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 ABHD4Q8TB40 342 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 IPCEF1Q8WWN9 437 aaPredicted RBP15.18■□□□□ 0.02
ITGB1-215ENST00000488494 MSI2Q96DH6 328 aaKnown RBP15.18■□□□□ 0.02
ITGB1-215ENST00000488494 NSL1Q96IY1 281 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 OR52D1Q9H346 318 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 HINT3Q9NQE9 182 aaKnown RBP15.18■□□□□ 0.02
ITGB1-215ENST00000488494 SLCO1C1Q9NYB5 712 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 ACTR3BQ9P1U1 418 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 TMCC3Q9ULS5 477 aa15.18■□□□□ 0.02
ITGB1-215ENST00000488494 LOC100289279A0A1B0GTE1 492 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 KHDRBS3O75525 346 aaKnown RBP15.17■□□□□ 0.02
ITGB1-215ENST00000488494 TXNDC12O95881 172 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 TACSTD2P09758 323 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 SLC6A6P31641 620 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 IL2RGP31785 369 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 MPV17P39210 176 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 MAGEB1P43366 347 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 HTR5AP47898 357 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 SCRN3Q0VDG4 424 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 CHRFAM7AQ494W8 412 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 FAM166AQ6J272 317 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 TMEM154Q6P9G4 183 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 SYT9Q86SS6 491 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 GLB1L2Q8IW92 636 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 ERMAPQ96PL5 475 aaPredicted RBP15.17■□□□□ 0.02
ITGB1-215ENST00000488494 SOX7Q9BT81 388 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 CHODLQ9H9P2 273 aa15.17■□□□□ 0.02
ITGB1-215ENST00000488494 NDRG4Q9ULP0 352 aaKnown RBP15.17■□□□□ 0.02
ITGB1-215ENST00000488494 COA3Q9Y2R0 106 aaPredicted RBP15.17■□□□□ 0.02
ITGB1-215ENST00000488494 C17orf100A8MU93 164 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 SGCEO43556 437 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 ICMTO60725 284 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 LILRA1O75019 489 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 MPZL1O95297 269 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 MT-ND5P03915 603 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 CALB2P22676 271 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 GCH1P30793 250 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 IFNGR2P38484 337 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 CDKN2AP42771 156 aaKnown RBP15.16■□□□□ 0.02
ITGB1-215ENST00000488494 PPP1CBP62140 327 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 CCL8P80075 99 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 AQP6Q13520 282 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 CCNIQ14094 377 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 MTX3Q5HYI7 312 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 TMEM255AQ5JRV8 349 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 PGBD2Q6P3X8 592 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 UNQ6126/PRO20091Q6UXV3 157 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 ZNF620Q6ZNG0 422 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 RINLQ6ZS11 566 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 VASH1Q7L8A9 365 aaPredicted RBP15.16■□□□□ 0.02
ITGB1-215ENST00000488494 JAZF1Q86VZ6 243 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 SLC25A40Q8TBP6 338 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 RDH5Q92781 318 aa15.16■□□□□ 0.02
ITGB1-215ENST00000488494 YIPF5Q969M3 257 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms