RNA–Protein interactions for RNA: ENST00000487451.1

TFE3-203, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 3

Gene TFE3, Length 1,058 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-203ENST00000487451 KLF17Q5JT82 389 aaPredicted RBP13.96□□□□□ -0.17
TFE3-203ENST00000487451 OTPQ5XKR4 325 aa13.96□□□□□ -0.17
TFE3-203ENST00000487451 Q6ZR03 302 aa13.96□□□□□ -0.17
TFE3-203ENST00000487451 FOXL2NBQ6ZUU3 175 aa13.96□□□□□ -0.17
TFE3-203ENST00000487451 SGMS2Q8NHU3 365 aa13.96□□□□□ -0.17
TFE3-203ENST00000487451 TSPEARQ8WU66 669 aa13.96□□□□□ -0.17
TFE3-203ENST00000487451 TAF15Q92804 592 aaKnown RBP eCLIP13.96□□□□□ -0.17
TFE3-203ENST00000487451 C1orf147Q96MC9 270 aaPredicted RBP13.96□□□□□ -0.17
TFE3-203ENST00000487451 INTS9Q9NV88 658 aaKnown RBP13.96□□□□□ -0.17
TFE3-203ENST00000487451 MED31Q9Y3C7 131 aa13.96□□□□□ -0.17
TFE3-203ENST00000487451 NPTNQ9Y639 398 aa13.96□□□□□ -0.17
TFE3-203ENST00000487451 TRAV27A0A087WT01 109 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 A0A0G2JND7 137 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 A0A1W2PPL8 197 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 TRAPPC2LH3BP13 241 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 ICMTO60725 284 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 CD55P08174 381 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 CST2P09228 141 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 ERFP50548 548 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 RPL27P61353 136 aaKnown RBP13.95□□□□□ -0.18
TFE3-203ENST00000487451 PSG7Q13046 419 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 BCL6BQ8N143 479 aaPredicted RBP13.95□□□□□ -0.18
TFE3-203ENST00000487451 LRRC58Q96CX6 371 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 C4orf45Q96LM5 186 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 MAGEB18Q96M61 343 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 ZNF48Q96MX3 618 aaPredicted RBP13.95□□□□□ -0.18
TFE3-203ENST00000487451 ZNF583Q96ND8 569 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 ALG12Q9BV10 488 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 POLR2J2Q9GZM3 115 aaKnown RBP13.95□□□□□ -0.18
TFE3-203ENST00000487451 EGLN1Q9GZT9 426 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 POLR2J3Q9H1A7 115 aaKnown RBP13.95□□□□□ -0.18
TFE3-203ENST00000487451 EMC7Q9NPA0 242 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 GMPR2Q9P2T1 348 aaKnown RBP13.95□□□□□ -0.18
TFE3-203ENST00000487451 STX18Q9P2W9 335 aaKnown RBP13.95□□□□□ -0.18
TFE3-203ENST00000487451 ZNF69Q9UC07 566 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 BAG5Q9UL15 447 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 A4GNTQ9UNA3 340 aa13.95□□□□□ -0.18
TFE3-203ENST00000487451 EDF1O60869 148 aaKnown RBP13.94□□□□□ -0.18
TFE3-203ENST00000487451 SBK2P0C263 348 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 IFI30P13284 250 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 GATA3P23771 443 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 CTXN1P60606 82 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 TNFAIP6P98066 277 aaPredicted RBP13.94□□□□□ -0.18
TFE3-203ENST00000487451 CDK5R2Q13319 367 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 TAF11Q15544 211 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 LRRC23Q53EV4 343 aaPredicted RBP13.94□□□□□ -0.18
TFE3-203ENST00000487451 CYBRD1Q53TN4 286 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 ST7LQ8TDW4 575 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 BPIFA2Q96DR5 249 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 SIGLEC11Q96RL6 698 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 MAN2C1Q9NTJ4 1040 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 TMEM106BQ9NUM4 274 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 EGFL7Q9UHF1 273 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 PURGQ9UJV8 347 aaKnown RBP13.94□□□□□ -0.18
TFE3-203ENST00000487451 ZDHHC8Q9ULC8 765 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 SNX13Q9Y5W8 968 aa13.94□□□□□ -0.18
TFE3-203ENST00000487451 SOX21Q9Y651 276 aaPredicted RBP13.94□□□□□ -0.18
TFE3-203ENST00000487451 DNAJC9-AS1A6NH13 148 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 J3KTA2 159 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 TMPRSS2O15393 492 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 TIMM8AO60220 97 aaPredicted RBP13.93□□□□□ -0.18
TFE3-203ENST00000487451 YAP1P46937 504 aaKnown RBP13.93□□□□□ -0.18
TFE3-203ENST00000487451 SLC3A1Q07837 685 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 CYLC2Q14093 348 aaPredicted RBP13.93□□□□□ -0.18
TFE3-203ENST00000487451 MTX3Q5HYI7 312 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 OR8J3Q8NGG0 315 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 OR13C2Q8NGS9 318 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 OR51A7Q8NH64 312 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 C10orf82Q8WW14 230 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 TPD52L3Q96J77 140 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 ECSITQ9BQ95 431 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 POLE4Q9NR33 117 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 CYSLTR2Q9NS75 346 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 RHCGQ9UBD6 479 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 TIMM10BQ9Y5J6 103 aa13.93□□□□□ -0.18
TFE3-203ENST00000487451 H3BSA7 217 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 FOXH1O75593 365 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 HKR1P10072 659 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 THRBP10828 461 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 ZNF26P17031 533 aaPredicted RBP13.92□□□□□ -0.18
TFE3-203ENST00000487451 MSR1P21757 451 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 SF3A3Q12874 501 aaKnown RBP eCLIP13.92□□□□□ -0.18
TFE3-203ENST00000487451 ZNF154Q13106 437 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 ZMYND11Q15326 602 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 NRMQ8IXM6 262 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 ZNF283Q8N7M2 679 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 OR2Z1Q8NG97 314 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 ITLN1Q8WWA0 313 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 SLC7A6Q92536 515 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 PRRC1Q96M27 445 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 RBP7Q96R05 134 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 ZNF747Q9BV97 191 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 TMEM120AQ9BXJ8 343 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 PATZ1Q9HBE1 687 aaKnown RBP13.92□□□□□ -0.18
TFE3-203ENST00000487451 DDX28Q9NUL7 540 aaKnown RBP13.92□□□□□ -0.18
TFE3-203ENST00000487451 CGGBP1Q9UFW8 167 aaPredicted RBP13.92□□□□□ -0.18
TFE3-203ENST00000487451 ADAM18Q9Y3Q7 739 aa13.92□□□□□ -0.18
TFE3-203ENST00000487451 PPIAL4EA0A075B759 164 aa13.91□□□□□ -0.18
TFE3-203ENST00000487451 PPIAL4CA0A0B4J2A2 164 aa13.91□□□□□ -0.18
TFE3-203ENST00000487451 GMNCA6NCL1 334 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms