RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 UBQLNLQ8IYU4 475 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 BEST3Q8N1M1 668 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 OR4M2Q8NGB6 313 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 ZNF671Q8TAW3 534 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 LGALS14Q8TCE9 139 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 DEDD2Q8WXF8 326 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 DNAJA3Q96EY1 480 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 C1orf198Q9H425 327 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 BRD7Q9NPI1 651 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 SLC17A5Q9NRA2 495 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 FOXJ2Q9P0K8 574 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 HHLA2Q9UM44 414 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 AK6Q9Y3D8 172 aaKnown RBP10.65□□□□□ -0.7
PKP4-213ENST00000486254 WDR87Q6ZQQ6 2873 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 PCSK5Q92824 1860 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 OTOGLQ3ZCN5 2332 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 IGKV1D-43A0A0B4J1Z2 117 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 LRRC3CA6NJW4 275 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 STMND1H3BQB6 276 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 LYRM1O43325 122 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 RAD1O60671 282 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 PAHP00439 452 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 PNPP00491 289 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 SFTPDP35247 375 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 RPS27P42677 84 aaKnown RBP10.65□□□□□ -0.71
PKP4-213ENST00000486254 LSM6P62312 80 aaKnown RBP10.65□□□□□ -0.71
PKP4-213ENST00000486254 HES3Q5TGS1 186 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 ZNF468Q5VIY5 522 aaPredicted RBP10.65□□□□□ -0.71
PKP4-213ENST00000486254 OR5H6Q8NGV6 325 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 ENKURQ8TC29 256 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 SMIM4Q8WVI0 70 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 C11orf40Q8WZ69 217 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 TMEM54Q969K7 222 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 PNPLA2Q96AD5 504 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 GNRHR2Q96P88 292 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 TMEM185BQ9H7F4 350 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 PLEKHA1Q9HB21 404 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 G6PC2Q9NQR9 355 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 ABI3Q9P2A4 366 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 CKLFQ9UBR5 152 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 ING1Q9UK53 422 aaPredicted RBP10.65□□□□□ -0.71
PKP4-213ENST00000486254 BOKQ9UMX3 212 aaPredicted RBP10.65□□□□□ -0.71
PKP4-213ENST00000486254 RCE1Q9Y256 329 aa10.65□□□□□ -0.71
PKP4-213ENST00000486254 PMS2P1A4D2B8 440 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 ANXA2P2A6NMY6 339 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 ZNF726A6NNF4 738 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 ZNF814B7Z6K7 855 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 ZNF878C9JN71 531 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 ANXA2P07355 339 aaKnown RBP10.64□□□□□ -0.71
PKP4-213ENST00000486254 SNRPBP14678 240 aaKnown RBP10.64□□□□□ -0.71
PKP4-213ENST00000486254 ADRA2CP18825 462 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 CSRP1P21291 193 aaKnown RBP10.64□□□□□ -0.71
PKP4-213ENST00000486254 DLSTP36957 453 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 CASRP41180 1078 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 INPP1P49441 399 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 PSMA6P60900 246 aaKnown RBP10.64□□□□□ -0.71
PKP4-213ENST00000486254 OR7E24Q6IFN5 339 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 FAM166AQ6J272 317 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 ESPNLQ6ZVH7 1005 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 MDGA2Q7Z553 956 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 ZNF227Q86WZ6 799 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 WDFY1Q8IWB7 410 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 TMEM123Q8N131 208 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 HAVCR1Q96D42 359 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 THAP7Q9BT49 309 aaPredicted RBP10.64□□□□□ -0.71
PKP4-213ENST00000486254 DHDHQ9UQ10 334 aa10.64□□□□□ -0.71
PKP4-213ENST00000486254 A0A1W2PPK0 400 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 SSX4O60224 188 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 H2BFMP0C1H6 154 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 IGFBP3P17936 291 aaPredicted RBP10.63□□□□□ -0.71
PKP4-213ENST00000486254 CNR1P21554 472 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 CTSSP25774 331 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 SLC6A1P30531 599 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 FOXK1P85037 733 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 MFGE8Q08431 387 aaPredicted RBP10.63□□□□□ -0.71
PKP4-213ENST00000486254 AIMP2Q13155 320 aaKnown RBP10.63□□□□□ -0.71
PKP4-213ENST00000486254 DYRK1AQ13627 763 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 TAB1Q15750 504 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 DCAF10Q5QP82 559 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 PLET1Q6UQ28 207 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 CREB3L2Q70SY1 520 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 SYT9Q86SS6 491 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 GPAT4Q86UL3 456 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 AKAP14Q86UN6 197 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 ELMOD2Q8IZ81 293 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 CELF2-AS1Q8N7Q2 184 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 NKAIN3Q8N8D7 197 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 OR5M1Q8NGP8 315 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 TSEN15Q8WW01 171 aaKnown RBP10.63□□□□□ -0.71
PKP4-213ENST00000486254 ASB5Q8WWX0 329 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 CREB3L1Q96BA8 519 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 SLAMF6Q96DU3 332 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 SLC25A38Q96DW6 304 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 ABHD1Q96SE0 405 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 MARVELD1Q9BSK0 173 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 EMC6Q9BV81 110 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 SLC25A18Q9H1K4 315 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 RNF121Q9H920 327 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 LIN7BQ9HAP6 207 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 ZFP64Q9NPA5 681 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms