RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TAF11Q15544 211 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 VMACQ2NL98 169 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 NRN1LQ496H8 165 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 KLF17Q5JT82 389 aaPredicted RBP11.74□□□□□ -0.53
VARS-226ENST00000483275 MBNL2Q5VZF2 373 aaKnown RBP11.74□□□□□ -0.53
VARS-226ENST00000483275 SLC25A47Q6Q0C1 308 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 JAZF1Q86VZ6 243 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 ST7LQ8TDW4 575 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 TMEM239Q8WW34 195 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 STON2Q8WXE9 905 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 ZNF48Q96MX3 618 aaPredicted RBP11.74□□□□□ -0.53
VARS-226ENST00000483275 EGLN1Q9GZT9 426 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 EMC7Q9NPA0 242 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 EGFL7Q9UHF1 273 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 RIMS3Q9UJD0 308 aa11.74□□□□□ -0.53
VARS-226ENST00000483275 PURGQ9UJV8 347 aaKnown RBP11.74□□□□□ -0.53
VARS-226ENST00000483275 FBP2O00757 339 aa11.73□□□□□ -0.53
VARS-226ENST00000483275 SCG5P05408 212 aa11.73□□□□□ -0.53
VARS-226ENST00000483275 ENDOGQ14249 297 aaKnown RBP11.73□□□□□ -0.53
VARS-226ENST00000483275 ZMYND11Q15326 602 aa11.73□□□□□ -0.53
VARS-226ENST00000483275 MOGQ16653 247 aa11.73□□□□□ -0.53
VARS-226ENST00000483275 Q6ZR03 302 aa11.73□□□□□ -0.53
VARS-226ENST00000483275 HDDC2Q7Z4H3 204 aa11.73□□□□□ -0.53
VARS-226ENST00000483275 LRRC58Q96CX6 371 aa11.73□□□□□ -0.53
VARS-226ENST00000483275 TXNIPQ9H3M7 391 aa11.73□□□□□ -0.53
VARS-226ENST00000483275 NPTNQ9Y639 398 aa11.73□□□□□ -0.53
VARS-226ENST00000483275 DOCK11Q5JSL3 2073 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 TRAV27A0A087WT01 109 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 IGHV3-64DA0A0J9YX35 117 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 ZNF205O95201 554 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 HKR1P10072 659 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 GATA3P23771 443 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 FPR2P25090 351 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
VARS-226ENST00000483275 GUCY1A3Q02108 690 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 PSG7Q13046 419 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 ZNF154Q13106 437 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 ALG10Q5BKT4 473 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 PRR31Q5SQ13 230 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 SLC30A8Q8IWU4 369 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 OR2Z1Q8NG97 314 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 SLC7A6Q92536 515 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 ZNF747Q9BV97 191 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 TMEM120AQ9BXJ8 343 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 SMURF2Q9HAU4 748 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 TMEM106BQ9NUM4 274 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 MRGBPQ9NV56 204 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 FGFR1OP2Q9NVK5 253 aa11.72□□□□□ -0.53
VARS-226ENST00000483275 PRKDCP78527 4128 aaKnown RBP11.71□□□□□ -0.53
VARS-226ENST00000483275 MDFIC2A0A1B0GVS7 189 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 CENPBD1B2RD01 187 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 FXYD1O00168 92 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 FOXH1O75593 365 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 OR5F1O95221 314 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 ABHD16AO95870 558 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 IGHMP01871 453 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 ADH4P08319 380 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 TSPAN19P0C672 248 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 IGHV4-38-2P0DP08 117 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 IFI30P13284 250 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 MDH1P40925 334 aaKnown RBP11.71□□□□□ -0.53
VARS-226ENST00000483275 YAP1P46937 504 aaKnown RBP11.71□□□□□ -0.53
VARS-226ENST00000483275 CTXN1P60606 82 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 RPL27P61353 136 aaKnown RBP11.71□□□□□ -0.53
VARS-226ENST00000483275 SF3A3Q12874 501 aaKnown RBP eCLIP11.71□□□□□ -0.532e-6■■■■■ 26.8
VARS-226ENST00000483275 LRRC23Q53EV4 343 aaPredicted RBP11.71□□□□□ -0.53
VARS-226ENST00000483275 MTX3Q5HYI7 312 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 INTS11Q5TA45 600 aaKnown RBP11.71□□□□□ -0.53
VARS-226ENST00000483275 FAM27BQ5VT28 67 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 NANOGP8Q6NSW7 305 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 C1orf94Q6P1W5 598 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 RBMS3Q6XE24 437 aaKnown RBP11.71□□□□□ -0.53
VARS-226ENST00000483275 CCDC80Q76M96 950 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 DOK3Q7L591 496 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 OR13C2Q8NGS9 318 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 ITLN1Q8WWA0 313 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 C4orf45Q96LM5 186 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 UNKLQ9H9P5 680 aaKnown RBP11.71□□□□□ -0.53
VARS-226ENST00000483275 GMPR2Q9P2T1 348 aaKnown RBP11.71□□□□□ -0.53
VARS-226ENST00000483275 RHCGQ9UBD6 479 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 KLHL21Q9UJP4 597 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 NUP50Q9UKX7 468 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 MED31Q9Y3C7 131 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 AUP1Q9Y679 476 aa11.71□□□□□ -0.53
VARS-226ENST00000483275 CD55P08174 381 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 CST2P09228 141 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 ZNF12P17014 697 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 OMGP23515 440 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 PRTN3P24158 256 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 HTR5AP47898 357 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 SLC3A1Q07837 685 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 BAMBIQ13145 260 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 METTL21CQ5VZV1 264 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 CALHM3Q86XJ0 350 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 TREML1Q86YW5 311 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 OR5AS1Q8N127 324 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 OR51A7Q8NH64 312 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 BPIFA2Q96DR5 249 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 TPD52L3Q96J77 140 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 SIGLEC11Q96RL6 698 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms