RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	CCNO	P22674	350 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	MSX2	P35548	267 aa	Predicted RBP	12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	MRPS11	P82912	194 aa	Known RBP	12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	GLO1	Q04760	184 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	FAM120AOS	Q5T036	256 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	SPATA46	Q5T0L3	261 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	ZNF774	Q6NX45	483 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	PGAM4	Q8N0Y7	254 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	ICA1L	Q8NDH6	482 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	C11orf40	Q8WZ69	217 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	MARS2	Q96GW9	593 aa	Known RBP	12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	RSRC1	Q96IZ7	334 aa	Known RBP	12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	ZNF570	Q96NI8	536 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	BEX2	Q9BXY8	128 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	RACGAP1	Q9H0H5	632 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	HINT3	Q9NQE9	182 aa	Known RBP	12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	ZNF275	Q9NSD4	429 aa	Predicted RBP	12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	GRHPR	Q9UBQ7	328 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	LPAR3	Q9UBY5	353 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	IL20RA	Q9UHF4	553 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	TAGLN3	Q9UI15	199 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	FAM32A	Q9Y421	112 aa	Known RBP	12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	TIMM10B	Q9Y5J6	103 aa		12.83	□□□□□ -0.36
CCNL1-222	ENST00000479596	ARPC2	O15144	300 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	NDUFB2	O95178	105 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	TGFA	P01135	160 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	NGF	P01138	241 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	MPV17	P39210	176 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	GDI2	P50395	445 aa	Known RBP	12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	KRR1	Q13601	381 aa	Known RBP	12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	CCNI	Q14094	377 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	OTP	Q5XKR4	325 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	PTCHD4	Q6ZW05	846 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	RRM2B	Q7LG56	351 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	SYT9	Q86SS6	491 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	OR52J3	Q8NH60	311 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	SLC25A40	Q8TBP6	338 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	IPCEF1	Q8WWN9	437 aa	Predicted RBP	12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	PYURF	Q96I23	114 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	SHARPIN	Q9H0F6	387 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	SLCO1C1	Q9NYB5	712 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	VSX1	Q9NZR4	365 aa	Predicted RBP	12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	MAGEL2	Q9UJ55	1249 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	ARL2BP	Q9Y2Y0	163 aa		12.82	□□□□□ -0.36
CCNL1-222	ENST00000479596	UNC119B	A6NIH7	251 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	XKRY	O14609	159 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	AHCYL1	O43865	530 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	IFNA2	P01563	188 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	SDHA	P31040	664 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	GPR6	P46095	362 aa	Predicted RBP	12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	MMP15	P51511	669 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	CDH15	P55291	814 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	SELENOV	P59797	346 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	PCBD1	P61457	104 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	CCL8	P80075	99 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	SAMD4B	Q5PRF9	694 aa	Known RBP	12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	MBNL2	Q5VZF2	373 aa	Known RBP	12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	ZER1	Q7Z7L7	766 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	CLDND2	Q8NHS1	167 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	ABHD4	Q8TB40	342 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	KLF14	Q8TD94	323 aa	Predicted RBP	12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	CDRT15	Q96T59	188 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	OR2J1	Q9GZK6	312 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	SYT4	Q9H2B2	425 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	NKIRAS2	Q9NYR9	191 aa		12.81	□□□□□ -0.36
CCNL1-222	ENST00000479596	C12orf71	A8MTZ7	269 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	SOCS2	O14508	198 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	GMNN	O75496	209 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	MPZL1	O95297	269 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	TXNDC12	O95881	172 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	CDKN2A	P42771	156 aa	Known RBP	12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	TMEM33	P57088	247 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	CR1L	Q2VPA4	569 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	PCGF3	Q3KNV8	242 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	GPR139	Q6DWJ6	353 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	TMEM154	Q6P9G4	183 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	DPY19L2P2	Q6ZN68	376 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	ALDH16A1	Q8IZ83	802 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	LINC01356	Q8N9X3	169 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	SNX33	Q8WV41	574 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	LRRC37B	Q96QE4	947 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	WAC	Q9BTA9	647 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	POFUT1	Q9H488	388 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	NARFL	Q9H6Q4	476 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	EIF3K	Q9UBQ5	218 aa	Known RBP	12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	GPR160	Q9UJ42	338 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	AURKC	Q9UQB9	309 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	IER3IP1	Q9Y5U9	82 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	CACNG2	Q9Y698	323 aa		12.8	□□□□□ -0.36
CCNL1-222	ENST00000479596	ZSCAN5B	A6NJL1	495 aa		12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	FAM157A	C9JC47	383 aa		12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	DCTN6	O00399	190 aa		12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	SLC16A7	O60669	478 aa		12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	CDC14B	O60729	498 aa		12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	GADD45G	O95257	159 aa		12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	IGHV1-46	P01743	117 aa		12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	COX5B	P10606	129 aa		12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	ITGA2	P17301	1181 aa		12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	GUCA1A	P43080	201 aa	Predicted RBP	12.79	□□□□□ -0.36
CCNL1-222	ENST00000479596	PPP1CB	P62140	327 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms