RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PIGXQ8TBF5 258 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 TEX47Q8TBZ9 253 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 CANT1Q8WVQ1 401 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM239Q8WW34 195 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ACOT11Q8WXI4 607 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 RND1Q92730 232 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 UFD1Q92890 307 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 SLC25A36Q96CQ1 311 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 MBD6Q96DN6 1003 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 SGTBQ96EQ0 304 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 LRRC46Q96FV0 321 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 CENPNQ96H22 339 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ARL5BQ96KC2 179 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ZFP3Q96NJ6 502 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 MNTQ99583 582 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 NPAS1Q99742 590 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 KLHDC3Q9BQ90 382 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 OR11A1Q9GZK7 315 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 NARFLQ9H6Q4 476 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 COQ10BQ9H8M1 238 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 REEP1Q9H902 201 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ZMAT3Q9HA38 289 aaKnown RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 GLRX2Q9NS18 164 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 GLTPQ9NZD2 209 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 NDUFAF4Q9P032 175 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 KLHL9Q9P2J3 617 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 A4GNTQ9UNA3 340 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 MEMO1Q9Y316 297 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 PCDHGB5Q9Y5G0 923 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 FAM208BQ5VWN6 2430 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ZGRF1Q86YA3 2104 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 TLN1Q9Y490 2541 aaKnown RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 PHF3Q92576 2039 aaKnown RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 A0A1W2PRG6 482 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 A0A1W2PRQ8 180 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 PQLC2LA1A4F0 135 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 MBD3L4A6NDZ8 208 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 MBD3L3A6NE82 208 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 MBD3L5A6NJ08 208 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 LIPT2A6NK58 231 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 LEUTXA8MZ59 168 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ATP6V1G2-DDX39BF2Z307 99 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 J3KTA2 159 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 TNFRSF11BO00300 401 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 CTDSP2O14595 271 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ABCD4O14678 606 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ZNHIT1O43257 154 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 LRRTM2O43300 516 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 EFNA2O43921 213 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF780AO75290 641 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 WISP2O76076 250 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 AGFG2O95081 481 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 VAMP5O95183 116 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 IGF2P01344 180 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 MT-ND1P03886 318 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 SEMG1P04279 462 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 CRHP06850 196 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 TMIGD3P0DMS9 266 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 SAGP10523 405 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 PLA2G2AP14555 144 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF3P17036 446 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 HLA-DMAP28067 261 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 SHC1P29353 583 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 TIMP3P35625 211 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 NR4A2P43354 598 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 MAGEA2P43356 314 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 UQCRFS1P47985 274 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 RAD23AP54725 363 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 CTBP2P56545 445 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 CXCR4P61073 352 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 VBP1P61758 197 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ADAM8P78325 824 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 VLDLRP98155 873 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 IFITM3Q01628 133 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 PMPCAQ10713 525 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 DGCR6Q14129 220 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF239Q16600 458 aaKnown RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 CTF1Q16619 201 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 CTU2Q2VPK5 515 aaKnown RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 Q3ZCU0 254 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 GAGE13Q4V321 117 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 OTUD3Q5T2D3 398 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 RIPPLY2Q5TAB7 128 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 XAF1Q6GPH4 301 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM225Q6GV28 225 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 OR2T5Q6IEZ7 315 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 PAQR6Q6TCH4 344 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 SLC16A12Q6ZSM3 486 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 MBOAT2Q6ZWT7 520 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 RHOUQ7L0Q8 258 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 FCRLAQ7L513 359 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 DHRSXQ8N5I4 330 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 FAM86B1Q8N7N1 296 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 PAPD5Q8NDF8 572 aaKnown RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 OR2T29Q8NH02 315 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 MBD3L2Q8NHZ7 208 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 DYNC2LI1Q8TCX1 351 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM255BQ8WV15 326 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ASB5Q8WWX0 329 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 FCGR1BQ92637 280 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms