RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ATG5Q9H1Y0 275 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 AKAP7Q9P0M2 348 aaPredicted RBP9.7□□□□□ -0.86
VPS52-217ENST00000478934 SUSD2Q9UGT4 822 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 LRP12Q9Y561 859 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 ARID1AO14497 2285 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 PLSCR5A0PG75 271 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 GGT3PA6NGU5 568 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 XRCC3O43542 346 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 GDF9O60383 454 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 IGF2P01344 180 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 IFNGR1P15260 489 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 NFYAP23511 347 aaPredicted RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 POLR2HP52434 150 aaKnown RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 RNF4P78317 190 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 LRFN4Q6PJG9 635 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 COX15Q7KZN9 410 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ZNF627Q7L945 461 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 TMED4Q7Z7H5 227 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 RTN4RL2Q86UN3 420 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ZNF679Q8IYX0 411 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 SDR16C5Q8N3Y7 309 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 D2HGDHQ8N465 521 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ZNF441Q8N8Z8 693 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 FAM3DQ96BQ1 224 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ZNF501Q96CX3 271 aaPredicted RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 DMRTA2Q96SC8 542 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 DHRS9Q9BPW9 319 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 MICU1Q9BPX6 476 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 MS4A7Q9GZW8 240 aaPredicted RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 TXNIPQ9H3M7 391 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 TMEM185BQ9H7F4 350 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ZNF230Q9UIE0 474 aaPredicted RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 MRPS18BQ9Y676 258 aaKnown RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 TMEM272A0A1B0GTI8 110 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 A0A1B0GX78 115 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 A8MVM7 634 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 MS4A18H0YCH9 400 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 SHOXO15266 292 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 DXOO77932 396 aaKnown RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 MS4A18Q3C1V0 323 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 MOGAT2Q3SYC2 334 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 C4orf46Q504U0 113 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 DMRTC1Q5HYR2 192 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 CLLU1Q5K131 121 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ELFN2Q5R3F8 820 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 OLFML2AQ68BL7 652 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 C11orf88Q6PI97 169 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 C3P1Q6ZMU1 363 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ZNF574Q6ZN55 896 aaPredicted RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 OR1J4Q8NGS1 313 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 STT3BQ8TCJ2 826 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ASB5Q8WWX0 329 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 GSX2Q9BZM3 304 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 AKIRIN1Q9H9L7 192 aaPredicted RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 CDV3Q9UKY7 258 aaKnown RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 EIF4E2O60573 245 aaKnown RBP9.69□□□□□ -0.86
VPS52-217ENST00000478934 PRAF2O60831 178 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ACSM4P0C7M7 580 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 RRASP10301 218 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ANOS1P23352 680 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 NUDT1P36639 197 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 RASGEF1BQ0VAM2 473 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 GLYATL3Q5SZD4 288 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 TMEM225Q6GV28 225 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 SLC18B1Q6NT16 456 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ANKRD16Q6P6B7 361 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 RNF144BQ7Z419 303 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 RNF128Q8TEB7 428 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 LINC00052Q96N35 136 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 ARL6Q9H0F7 186 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 FBXO4Q9UKT5 387 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 AUP1Q9Y679 476 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 TMEM14AQ9Y6G1 99 aa9.69□□□□□ -0.86
VPS52-217ENST00000478934 OR2M5A3KFT3 312 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 NAP1L6A6NFF2 107 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 MCRIP1C9JLW8 97 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 H7C417 338 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 TO15178 435 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 NUPL2O15504 423 aaKnown RBP9.68□□□□□ -0.86
VPS52-217ENST00000478934 SULT1B1O43704 296 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 DUX1O43812 170 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 EFNA2O43921 213 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 PNLIPRP2P54317 469 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 DCXRQ7Z4W1 244 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 PLXDC1Q8IUK5 500 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 APCDD1LQ8NCL9 501 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 GALNT11Q8NCW6 608 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 TNFAIP8L1Q8WVP5 186 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 CENPMQ9NSP4 180 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 PTTG3PQ9NZH4 202 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 MTFP1Q9UDX5 166 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 DHDHQ9UQ10 334 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 FARSAQ9Y285 508 aaKnown RBP9.68□□□□□ -0.86
VPS52-217ENST00000478934 ETV7Q9Y603 341 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 FTCDNL1E5RQL4 147 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 ALOX12BO75342 701 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 AHSA1O95433 338 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 KLK2P20151 261 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 MAP2K6P52564 334 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 DCAF7P61962 342 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms