RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SDR39U1Q9NRG7 319 aaPredicted RBP14.39□□□□□ -0.11
VIM-204ENST00000478746 ZNF229Q9UJW7 825 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 RNF114Q9Y508 228 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 IGHV2-70DA0A0C4DH43 119 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 A0A1W2PRG6 482 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 CENPBD1B2RD01 187 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 MCIDASD6RGH6 385 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 FMO6PO60774 539 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 TRMUO75648 421 aaKnown RBP14.38□□□□□ -0.11
VIM-204ENST00000478746 KITP10721 976 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 ACADSP16219 412 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 CPT2P23786 658 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 ZNF133P52736 654 aaPredicted RBP14.38□□□□□ -0.11
VIM-204ENST00000478746 GNB2P62879 340 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 ERVK-25P63136 954 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 PDCD1Q15116 288 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 C10orf128Q5T292 105 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 ARMC8Q8IUR7 673 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 OR9I1Q8NGQ6 314 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 C4orf45Q96LM5 186 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 SEPHS2Q99611 448 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 CHIAQ9BZP6 476 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 MAN2C1Q9NTJ4 1040 aa14.38□□□□□ -0.11
VIM-204ENST00000478746 KIR2DS1A0A191URI9 304 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 SLC22A31A6NKX4 558 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 TMEM178BH3BS89 294 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 KPNA4O00629 521 aaPredicted RBP14.37□□□□□ -0.11
VIM-204ENST00000478746 SURF4O15260 269 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 SLC2A10O95528 541 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 F13BP05160 661 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 ASAH2BP0C7U1 165 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 SLC6A2P23975 617 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 AQP1P29972 269 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 BPIFB3P59826 476 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 SCARB2Q14108 478 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 TAF11Q15544 211 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 ARL9Q6T311 187 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 HDDC2Q7Z4H3 204 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 NANOGNBQ7Z5D8 188 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 CROCCP2Q86T23 111 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 TMEM86BQ8N661 226 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 ITLN1Q8WWA0 313 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 NABP1Q96AH0 204 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 PLEKHA8Q96JA3 519 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 CENPHQ9H3R5 247 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 THAP1Q9NVV9 213 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 SLC25A37Q9NYZ2 338 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.37□□□□□ -0.11
VIM-204ENST00000478746 MIOXQ9UGB7 285 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 IL19Q9UHD0 177 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 UGT2A1Q9Y4X1 527 aa14.37□□□□□ -0.11
VIM-204ENST00000478746 CPSF4LA6NMK7 179 aaKnown RBP14.36□□□□□ -0.11
VIM-204ENST00000478746 M0R3H8 397 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 UBDO15205 165 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 ICMTO60725 284 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 RPS2P15880 293 aaKnown RBP14.36□□□□□ -0.11
VIM-204ENST00000478746 HOXB9P17482 250 aaPredicted RBP14.36□□□□□ -0.11
VIM-204ENST00000478746 ENTPD8Q5MY95 495 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 GPR157Q5UAW9 335 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 ZNF774Q6NX45 483 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 ZNF620Q6ZNG0 422 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 Q6ZR03 302 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 HDXQ7Z353 690 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 KLBQ86Z14 1044 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 C10orf111Q8N326 155 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 SMYD1Q8NB12 490 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 FAM110DQ8TAY7 271 aaPredicted RBP14.36□□□□□ -0.11
VIM-204ENST00000478746 ASB10Q8WXI3 467 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 NSMAFQ92636 917 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 MAELQ96JY0 434 aaKnown RBP14.36□□□□□ -0.11
VIM-204ENST00000478746 FAM71F1Q96KD3 344 aaPredicted RBP14.36□□□□□ -0.11
VIM-204ENST00000478746 OR2H1Q9GZK4 316 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 WNT5BQ9H1J7 359 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 TMEM165Q9HC07 324 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 TCF7L1Q9HCS4 588 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 TIMM10BQ9Y5J6 103 aa14.36□□□□□ -0.11
VIM-204ENST00000478746 SNNO75324 88 aaPredicted RBP14.35□□□□□ -0.11
VIM-204ENST00000478746 CLPXO76031 633 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 LYPD3O95274 346 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 THY1P04216 161 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 GSTM3P21266 225 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 PPIBP23284 216 aaKnown RBP14.35□□□□□ -0.11
VIM-204ENST00000478746 DAP3P51398 398 aaKnown RBP14.35□□□□□ -0.11
VIM-204ENST00000478746 UGT2B15P54855 530 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 RPL18Q07020 188 aaKnown RBP14.35□□□□□ -0.11
VIM-204ENST00000478746 FAM27BQ5VT28 67 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 SLC27A4Q6P1M0 643 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 MSRB3Q8IXL7 192 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 ANKRD42Q8N9B4 389 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 DACT3Q96B18 629 aaPredicted RBP14.35□□□□□ -0.11
VIM-204ENST00000478746 OR2V2Q96R30 315 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 NUDT16L1Q9BRJ7 211 aaKnown RBP14.35□□□□□ -0.11
VIM-204ENST00000478746 TMEM38AQ9H6F2 299 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 SMURF2Q9HAU4 748 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 ASH2LQ9UBL3 628 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 SLC7A7Q9UM01 511 aa14.35□□□□□ -0.11
VIM-204ENST00000478746 IFNL4K9M1U5 179 aa14.34□□□□□ -0.11
VIM-204ENST00000478746 ZNF205O95201 554 aa14.34□□□□□ -0.11
VIM-204ENST00000478746 TSPAN15O95858 294 aa14.34□□□□□ -0.11
VIM-204ENST00000478746 MELTFP08582 738 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms