RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 PATL1Q86TB9 770 aaKnown RBP8.13□□□□□ -1.11
CCM2-210ENST00000478169 RBM45Q8IUH3 476 aaKnown RBP8.13□□□□□ -1.11
CCM2-210ENST00000478169 SLC30A8Q8IWU4 369 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 ZNF283Q8N7M2 679 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 OR52E2Q8NGJ4 325 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 AKR7LQ8NHP1 331 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 ABHD4Q8TB40 342 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 FNDC8Q8TC99 324 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 LIPHQ8WWY8 451 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 NMD3Q96D46 503 aaKnown RBP8.13□□□□□ -1.11
CCM2-210ENST00000478169 DCLRE1CQ96SD1 692 aaKnown RBP8.13□□□□□ -1.11
CCM2-210ENST00000478169 PRSS27Q9BQR3 290 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 CPPED1Q9BRF8 314 aaPredicted RBP8.13□□□□□ -1.11
CCM2-210ENST00000478169 OR2H1Q9GZK4 316 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 MSL2Q9HCI7 577 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 MEPEQ9NQ76 525 aaPredicted RBP8.13□□□□□ -1.11
CCM2-210ENST00000478169 TUBG2Q9NRH3 451 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 OR5V1Q9UGF6 321 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 IL20RAQ9UHF4 553 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 UGT2A1Q9Y4X1 527 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 TIMM10BQ9Y5J6 103 aa8.13□□□□□ -1.11
CCM2-210ENST00000478169 SURF4O15260 269 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 OR7A10O76100 309 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 SLC2A10O95528 541 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 NGFP01138 241 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 OPN1SWP03999 348 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 CST2P09228 141 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 TSPAN19P0C672 248 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 AQP2P41181 271 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 RBM34P42696 430 aaKnown RBP8.12□□□□□ -1.11
CCM2-210ENST00000478169 GUCA1AP43080 201 aaPredicted RBP8.12□□□□□ -1.11
CCM2-210ENST00000478169 PCBD1P61457 104 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 SEC61A1P61619 476 aaKnown RBP8.12□□□□□ -1.11
CCM2-210ENST00000478169 ERVK-25P63136 954 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 TAF11Q15544 211 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 CYP51A1Q16850 503 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 ESCO2Q56NI9 601 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 ZNF362Q5T0B9 420 aaPredicted RBP8.12□□□□□ -1.11
CCM2-210ENST00000478169 C16orf87Q6PH81 154 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 SLC25A47Q6Q0C1 308 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 TSPYL5Q86VY4 417 aaPredicted RBP8.12□□□□□ -1.11
CCM2-210ENST00000478169 MUC20Q8N307 709 aaPredicted RBP8.12□□□□□ -1.11
CCM2-210ENST00000478169 OR4D11Q8NGI4 311 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 VANGL1Q8TAA9 524 aaPredicted RBP8.12□□□□□ -1.11
CCM2-210ENST00000478169 RASSF5Q8WWW0 418 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 NSMAFQ92636 917 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 HDAC2Q92769 488 aaKnown RBP8.12□□□□□ -1.11
CCM2-210ENST00000478169 TMIGD2Q96BF3 282 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 C4orf45Q96LM5 186 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 C7orf26Q96N11 449 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 RBP7Q96R05 134 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 CCDC28BQ9BUN5 200 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 PARD6BQ9BYG5 372 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 WNT5BQ9H1J7 359 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 TXNIPQ9H3M7 391 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 MAN2C1Q9NTJ4 1040 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 DCAF16Q9NXF7 216 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 IL19Q9UHD0 177 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 NDRG4Q9ULP0 352 aaKnown RBP8.12□□□□□ -1.11
CCM2-210ENST00000478169 LRCH1Q9Y2L9 728 aa8.12□□□□□ -1.11
CCM2-210ENST00000478169 PRKDCP78527 4128 aaKnown RBP8.11□□□□□ -1.11
CCM2-210ENST00000478169 IGKV1D-43A0A0B4J1Z2 117 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 IFNL4K9M1U5 179 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 TIMM8AO60220 97 aaPredicted RBP8.11□□□□□ -1.11
CCM2-210ENST00000478169 COX5BP10606 129 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 GSTM3P21266 225 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 KITLGP21583 273 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 MDKP21741 143 aaPredicted RBP8.11□□□□□ -1.11
CCM2-210ENST00000478169 LAP3P28838 519 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 CD80P33681 288 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 MDH2P40926 338 aaKnown RBP8.11□□□□□ -1.11
CCM2-210ENST00000478169 IDH3AP50213 366 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 FMODQ06828 376 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 CD47Q08722 323 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 PSG7Q13046 419 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 ZMYND11Q15326 602 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 AGKQ53H12 422 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 INTS11Q5TA45 600 aaKnown RBP8.11□□□□□ -1.11
CCM2-210ENST00000478169 BTNL3Q6UXE8 466 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 LRRN1Q6UXK5 716 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 SYT9Q86SS6 491 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 PARP8Q8N3A8 854 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 NPEPL1Q8NDH3 523 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 OR2Z1Q8NG97 314 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 SLC26A7Q8TE54 656 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 UPRTQ96BW1 309 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 TAMM41Q96BW9 452 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 ZBTB9Q96C00 473 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 SGTBQ96EQ0 304 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 THOC1Q96FV9 657 aaKnown RBP8.11□□□□□ -1.11
CCM2-210ENST00000478169 SIGLEC11Q96RL6 698 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 WACQ9BTA9 647 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 ALG12Q9BV10 488 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 POLR2J2Q9GZM3 115 aaKnown RBP8.11□□□□□ -1.11
CCM2-210ENST00000478169 POLR2J3Q9H1A7 115 aaKnown RBP8.11□□□□□ -1.11
CCM2-210ENST00000478169 PRDM13Q9H4Q3 707 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 RABEP2Q9H5N1 569 aa8.11□□□□□ -1.11
CCM2-210ENST00000478169 NANOGQ9H9S0 305 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms