RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZER1Q7Z7L7 766 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 RANBP3LQ86VV4 465 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-213ENST00000476777 KLBQ86Z14 1044 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 C10orf111Q8N326 155 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 OR2Z1Q8NG97 314 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 OR9I1Q8NGQ6 314 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 ITLN1Q8WWA0 313 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 ROPN1BQ9BZX4 212 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-213ENST00000476777 OR2H1Q9GZK4 316 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 WNT5BQ9H1J7 359 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 ROPN1Q9HAT0 212 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-213ENST00000476777 TMEM165Q9HC07 324 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 TCF7L1Q9HCS4 588 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 SDR39U1Q9NRG7 319 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-213ENST00000476777 ZIM2Q9NZV7 527 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 ASH2LQ9UBL3 628 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF229Q9UJW7 825 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 POMT1Q9Y6A1 747 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 IGKV1D-43A0A0B4J1Z2 117 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 PRORSD1PA6NEY8 169 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 CHP2O43745 196 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 FMO6PO60774 539 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 ERLIN1O75477 346 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 TRMUO75648 421 aaKnown RBP9.48□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF205O95201 554 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 THY1P04216 161 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 HIST1H2ABP04908 130 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 RPS2P15880 293 aaKnown RBP9.48□□□□□ -0.89
BRCA1-213ENST00000476777 MMP16P51512 607 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 POLR2JP52435 117 aaKnown RBP9.48□□□□□ -0.89
BRCA1-213ENST00000476777 GNB2P62879 340 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 ERVK-25P63136 954 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 IFFO1Q0D2I5 559 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 BST1Q10588 318 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 STX3Q13277 289 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 RUSC1-AS1Q66K80 236 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 HIST3H2AQ7L7L0 130 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 FITM2Q8N6M3 262 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 ASB10Q8WXI3 467 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 HIST1H2ACQ93077 130 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 NMD3Q96D46 503 aaKnown RBP9.48□□□□□ -0.89
BRCA1-213ENST00000476777 FAM71F1Q96KD3 344 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-213ENST00000476777 C4orf45Q96LM5 186 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF607Q96SK3 696 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 MCHR1Q99705 422 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 ELOVL3Q9HB03 270 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 GCM1Q9NP62 436 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 MAN2C1Q9NTJ4 1040 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 SLC25A37Q9NYZ2 338 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 MIOXQ9UGB7 285 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 IL19Q9UHD0 177 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 SLC13A4Q9UKG4 626 aa9.48□□□□□ -0.89
BRCA1-213ENST00000476777 A0A1W2PRG6 482 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 TRPC5OSA6NMA1 111 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 MCIDASD6RGH6 385 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 C3orf80F5H4A9 247 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 G3V4G9 280 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 BLOC1S5-TXNDC5H3BN57 136 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 M0R3H8 397 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 KPNA4O00629 521 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-213ENST00000476777 HDAC3O15379 428 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 PIN1P1O15428 100 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 F13BP05160 661 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 ACADSP16219 412 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 KITLGP21583 273 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 AQP1P29972 269 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 ARHGDIAP52565 204 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 UGT2B15P54855 530 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 FGF12P61328 243 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 RPL18Q07020 188 aaKnown RBP9.47□□□□□ -0.89
BRCA1-213ENST00000476777 TAF11Q15544 211 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 NPTX1Q15818 432 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 SGCAQ16586 387 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 C2orf68Q2NKX9 166 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 KPRPQ5T749 579 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-213ENST00000476777 GPR157Q5UAW9 335 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 FAM27BQ5VT28 67 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 NXNQ6DKJ4 435 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 SLC27A4Q6P1M0 643 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 SLC2A7Q6PXP3 512 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 NANOGNBQ7Z5D8 188 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 ARMC8Q8IUR7 673 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 MSRB3Q8IXL7 192 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 ALDH16A1Q8IZ83 802 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 C10orf82Q8WW14 230 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 SSMEM1Q8WWF3 244 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.47□□□□□ -0.89
BRCA1-213ENST00000476777 DYRK2Q92630 601 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 NSMAFQ92636 917 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 PLEKHA8Q96JA3 519 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 OR2V2Q96R30 315 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 NUDT16L1Q9BRJ7 211 aaKnown RBP9.47□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF426Q9BUY5 554 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 POFUT1Q9H488 388 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 EVA1AQ9H8M9 152 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 SMURF2Q9HAU4 748 aa9.47□□□□□ -0.89
BRCA1-213ENST00000476777 C5orf63A6NC05 138 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 CPSF4LA6NMK7 179 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms