RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 TIMM10BQ9Y5J6 103 aa14.67□□□□□ -0.06
SCAF11-206ENST00000474828 A0A1W2PPL8 197 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 RIIAD1A6NNX1 92 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 ATP6V1G2-DDX39BF2Z307 99 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 MITFO75030 526 aaPredicted RBP14.66□□□□□ -0.06
SCAF11-206ENST00000474828 MPZL1O95297 269 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 PTHP01270 115 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 RAF1P04049 648 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 ZNF3P17036 446 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 EPHA2P29317 976 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 GGT2P36268 569 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 CAPZA2P47755 286 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 CENPAP49450 140 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 AQP6Q13520 282 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 RAB39AQ14964 217 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 TEX30Q5JUR7 227 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 SLX4IPQ5VYV7 408 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 DEPDC4Q8N2C3 294 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 LRRC18Q8N456 261 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 CYB561A3Q8NBI2 242 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 FBXW5Q969U6 566 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 DHRS9Q9BPW9 319 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 WNT5BQ9H1J7 359 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 KCNN2Q9H2S1 579 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 FN3KQ9H479 309 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 ZNF442Q9H7R0 627 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 MARCH7Q9H992 704 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 MRPL22Q9NWU5 206 aaKnown RBP14.66□□□□□ -0.06
SCAF11-206ENST00000474828 CISD1Q9NZ45 108 aaKnown RBP14.66□□□□□ -0.06
SCAF11-206ENST00000474828 KIF17Q9P2E2 1029 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 KCNG2Q9UJ96 466 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 ROS1P08922 2347 aa14.66□□□□□ -0.06
SCAF11-206ENST00000474828 OVOL3O00110 214 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 SPI1P17947 270 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 NR4A1P22736 598 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 IGFBP5P24593 272 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 PCSK6P29122 969 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 ALDH3A2P51648 485 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 BLVRAP53004 296 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 CDH11P55287 796 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 DAG1Q14118 895 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 PABPC1L2AQ5JQF8 200 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 C12orf73Q69YU5 71 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 SLC22A25Q6T423 547 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 POM121L2Q96KW2 1035 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 HCAR1Q9BXC0 346 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 CXXC4Q9H2H0 198 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 EMC7Q9NPA0 242 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 CYB5R1Q9UHQ9 305 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 LHFPL6Q9Y693 200 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 PLCE1Q9P212 2302 aa14.65□□□□□ -0.06
SCAF11-206ENST00000474828 OR6C6A6NF89 314 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 SAC3D1A6NKF1 404 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 CD8AP01732 235 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 SLC2A5P22732 501 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 POU1F1P28069 291 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 TEKQ02763 1124 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 SCRN3Q0VDG4 424 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 NPRL3Q12980 569 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 KRTAP27-1Q3LI81 207 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 TMEM236Q5W0B7 351 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 C11orf71Q6IPW1 123 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 ICA1LQ8NDH6 482 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 SLC30A7Q8NEW0 376 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 SMAP2Q8WU79 429 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-206ENST00000474828 PIGTQ969N2 578 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 UBTD1Q9HAC8 227 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 CCNB1IP1Q9NPC3 277 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 CA10Q9NS85 328 aa14.64□□□□□ -0.07
SCAF11-206ENST00000474828 ZNF701Q9NV72 531 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-206ENST00000474828 LOC100509620A0A075B734 347 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 ANKRD65E5RJM6 399 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 EI24O14681 340 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 PRODHO43272 600 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 SYNGR3O43761 229 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 GPANK1O95872 356 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 SOD3P08294 240 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 APOBEC3AP31941 199 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-206ENST00000474828 TTKP33981 857 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 PLP2Q04941 152 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 DBPQ10586 325 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-206ENST00000474828 TESK1Q15569 626 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 VASH1Q7L8A9 365 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-206ENST00000474828 PAQR4Q8N4S7 273 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-206ENST00000474828 OR1J2Q8NGS2 313 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 TMEM171Q8WVE6 324 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 FOXN4Q96NZ1 517 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 C9orf16Q9BUW7 83 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 TRAF4Q9BUZ4 470 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-206ENST00000474828 TEX12Q9BXU0 123 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 RNF121Q9H920 327 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 HINT3Q9NQE9 182 aaKnown RBP14.63□□□□□ -0.07
SCAF11-206ENST00000474828 BEX4Q9NWD9 120 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-206ENST00000474828 ASH2LQ9UBL3 628 aa14.63□□□□□ -0.07
SCAF11-206ENST00000474828 IQCMA0A1B0GVH7 501 aa14.62□□□□□ -0.07
SCAF11-206ENST00000474828 GLCEO94923 617 aa14.62□□□□□ -0.07
SCAF11-206ENST00000474828 CLUP10909 449 aa14.62□□□□□ -0.07
SCAF11-206ENST00000474828 STOMP27105 288 aa14.62□□□□□ -0.07
SCAF11-206ENST00000474828 APEX1P27695 318 aaKnown RBP14.62□□□□□ -0.07
SCAF11-206ENST00000474828 PYCR1P32322 319 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms