RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PMEPA1Q969W9 287 aa19■□□□□ 0.63
COL18A1-207ENST00000473212 B3GNT4Q9C0J1 378 aa19■□□□□ 0.63
COL18A1-207ENST00000473212 DHCR7Q9UBM7 475 aaKnown RBP19■□□□□ 0.63
COL18A1-207ENST00000473212 UPB1Q9UBR1 384 aa19■□□□□ 0.63
COL18A1-207ENST00000473212 DHDHQ9UQ10 334 aa19■□□□□ 0.63
COL18A1-207ENST00000473212 SHISA7A6NL88 538 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 MPZL1O95297 269 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 IL33O95760 270 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 AMY2AP04746 511 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 SPARCP09486 303 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 MRPS21P82921 87 aaKnown RBP18.99■□□□□ 0.63
COL18A1-207ENST00000473212 ZP2Q05996 745 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 NR0B2Q15466 257 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 TMEM225Q6GV28 225 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 FDX2Q6P4F2 183 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 TTLL10Q6ZVT0 673 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 BEST3Q8N1M1 668 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 EIF4E3Q8N5X7 224 aaKnown RBP18.99■□□□□ 0.63
COL18A1-207ENST00000473212 PXT1Q8NFP0 134 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 ST8SIA2Q92186 375 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 SLC25A28Q96A46 364 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 POTEKPQ9BYX7 375 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 SLC17A5Q9NRA2 495 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 LANCL2Q9NS86 450 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 CGGBP1Q9UFW8 167 aaPredicted RBP18.99■□□□□ 0.63
COL18A1-207ENST00000473212 FBXO4Q9UKT5 387 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 B9D1Q9UPM9 204 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 HSPB2A8KAH6 182 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 ALOX12BO75342 701 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 DRD1P21728 446 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 HSD17B7P56937 341 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 SKP1P63208 163 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 SSBP1Q04837 148 aaKnown RBP18.99■□□□□ 0.63
COL18A1-207ENST00000473212 HSPB2Q16082 182 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 GLYATL3Q5SZD4 288 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 ZNF679Q8IYX0 411 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 OR1J2Q8NGS2 313 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 TAS2R4Q9NYW5 299 aa18.99■□□□□ 0.63
COL18A1-207ENST00000473212 NAT1P18440 290 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 CAPZBP47756 277 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 CCINQ13939 588 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 C17orf107Q6ZR85 190 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 RNF128Q8TEB7 428 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 MRPL22Q9NWU5 206 aaKnown RBP18.98■□□□□ 0.63
COL18A1-207ENST00000473212 OR6A2O95222 327 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 HTR2CP28335 458 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 KIAA0895LQ68EN5 471 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 OR10K2Q6IF99 312 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 TMEM229BQ8NBD8 167 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 ASB5Q8WWX0 329 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 METTL21AQ8WXB1 218 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 THRSPQ92748 146 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 MRPL38Q96DV4 380 aaKnown RBP18.98■□□□□ 0.63
COL18A1-207ENST00000473212 SLC38A3Q99624 504 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 OR11A1Q9GZK7 315 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 ADAM19Q9H013 955 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 SLC25A32Q9H2D1 315 aa18.98■□□□□ 0.63
COL18A1-207ENST00000473212 FARSAQ9Y285 508 aaKnown RBP18.98■□□□□ 0.63
COL18A1-207ENST00000473212 SLC16A7O60669 478 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 BGLAPP02818 100 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 ICAM2P13598 275 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 MGMTP16455 207 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 CXCR1P25024 350 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 INSM1Q01101 510 aaPredicted RBP18.97■□□□□ 0.63
COL18A1-207ENST00000473212 TEX30Q5JUR7 227 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 GLT8D1Q68CQ7 371 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 SLC18B1Q6NT16 456 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 OR10K1Q8NGX5 313 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 TCTN2Q96GX1 697 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 NPAS1Q99742 590 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 PTDSS2Q9BVG9 487 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 TPSD1Q9BZJ3 242 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 MMP17Q9ULZ9 603 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 MRPS18BQ9Y676 258 aaKnown RBP18.97■□□□□ 0.63
COL18A1-207ENST00000473212 DCDC2BA2VCK2 349 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 BLACEA4D250 179 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 CSN2P05814 226 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 MELTFP08582 738 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 CTLA4P16410 223 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 ACKR1Q16570 336 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 SCGB2B2Q4G0G5 96 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 ATPAF1Q5TC12 328 aaPredicted RBP18.97■□□□□ 0.63
COL18A1-207ENST00000473212 IQCF2Q8IXL9 164 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 OR51A2Q8NGJ7 313 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 ASB13Q8WXK3 278 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 SLC41A2Q96JW4 573 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 SLC25A21Q9BQT8 299 aaPredicted RBP18.97■□□□□ 0.63
COL18A1-207ENST00000473212 MESP1Q9BRJ9 268 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 NUDT9Q9BW91 350 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 WDR13Q9H1Z4 485 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 TMEM185BQ9H7F4 350 aa18.97■□□□□ 0.63
COL18A1-207ENST00000473212 CABIN1Q9Y6J0 2220 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 OR5H14A6NHG9 310 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 UBBP0CG47 229 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 UBCP0CG48 685 aaKnown RBP18.96■□□□□ 0.63
COL18A1-207ENST00000473212 LIPCP11150 499 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 ZNF28P17035 718 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 IL11P20809 199 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 PPICP45877 212 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 NR0B1P51843 470 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms