RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 CD47Q08722 323 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 SGCAQ16586 387 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 RABL3Q5HYI8 236 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 MBNL2Q5VZF2 373 aaKnown RBP11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 ZER1Q7Z7L7 766 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 KLHL36Q8N4N3 616 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 SPICQ8N5J4 248 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 AKR7LQ8NHP1 331 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 ABHD4Q8TB40 342 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 KLF14Q8TD94 323 aaPredicted RBP11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 RCN3Q96D15 328 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 MARS2Q96GW9 593 aaKnown RBP11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 MRPL13Q9BYD1 178 aaKnown RBP11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 OR2J1Q9GZK6 312 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 FAM107BQ9H098 131 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 NUP50Q9UKX7 468 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 NPTNQ9Y639 398 aa11.75□□□□□ -0.53
SEMA3F-208ENST00000470737 ZSCAN5BA6NJL1 495 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 FAM220BPB1ANY3 271 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 DCTN3O75935 186 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 SLC2A10O95528 541 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 FAM107AO95990 144 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 IFNA14P01570 189 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 MT-ND1P03886 318 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 SBK2P0C263 348 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 TNFSF4P23510 183 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 PRTN3P24158 256 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 CDAP32320 146 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 WNT5AP41221 380 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 ARHGDIAP52565 204 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 UGT2B15P54855 530 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 PPP1CBP62140 327 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 ERVK-25P63136 954 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 BAMBIQ13145 260 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 TAF11Q15544 211 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 ARL9Q6T311 187 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 SLC15A3Q8IY34 581 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 ZNF101Q8IZC7 436 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 POU5F2Q8N7G0 328 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 OR4D11Q8NGI4 311 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 NSMAFQ92636 917 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 DVL3Q92997 716 aaPredicted RBP11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 SGTBQ96EQ0 304 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 POM121L2Q96KW2 1035 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 DCLRE1CQ96SD1 692 aaKnown RBP11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 CCT8L2Q96SF2 557 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 ZNF426Q9BUY5 554 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 MRI1Q9BV20 369 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 PCDHAC1Q9H158 963 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 SMURF2Q9HAU4 748 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 ELOVL3Q9HB03 270 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 PURGQ9UJV8 347 aaKnown RBP11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 AUP1Q9Y679 476 aa11.74□□□□□ -0.53
SEMA3F-208ENST00000470737 MEGF8Q7Z7M0 2845 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 DNAJC9-AS1A6NH13 148 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 TIMM8AO60220 97 aaPredicted RBP11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 OR7A10O76100 309 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 ADH4P08319 380 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 AQP2P41181 271 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 RBM34P42696 430 aaKnown RBP11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 ZNF133P52736 654 aaPredicted RBP11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 TAS2R41P59536 307 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 TNFAIP6P98066 277 aaPredicted RBP11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 DOK3Q7L591 496 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 OR2T12Q8NG77 320 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 GEMIN6Q8WXD5 167 aaKnown RBP11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 DUX5Q96PT3 197 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 SEPHS2Q99611 448 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 PRSS27Q9BQR3 290 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 MEPEQ9NQ76 525 aaPredicted RBP11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 PLEK2Q9NYT0 353 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 ABCD2Q9UBJ2 740 aa11.73□□□□□ -0.53
SEMA3F-208ENST00000470737 LOC100509620A0A075B734 347 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 ELOVL7A1L3X0 281 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 IGHMP01871 453 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 CD55P08174 381 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 TNFRSF1AP19438 455 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 GSTM3P21266 225 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 ZFP36P26651 326 aaKnown RBP11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 CRYBA2P53672 197 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 PCBD1P61457 104 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 IL13RA1P78552 427 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 PSG4Q00888 419 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 FMODQ06828 376 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 ZNF154Q13106 437 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 TOP3AQ13472 1001 aaPredicted RBP11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 MTX3Q5HYI7 312 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 FAM27BQ5VT28 67 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 RFPL4BQ6ZWI9 263 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 MICU2Q8IYU8 434 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 DEFB108BQ8NET1 73 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 PFN4Q8NHR9 129 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 FNDC8Q8TC99 324 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 SLC25A28Q96A46 364 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 NABP1Q96AH0 204 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 TAMM41Q96BW9 452 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 RBP7Q96R05 134 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 ALG12Q9BV10 488 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 OR2H1Q9GZK4 316 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 POLR2J2Q9GZM3 115 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms