RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 OR6K6Q8NGW6 343 aa13.94□□□□□ -0.18
GPC1-207ENST00000466624 FGFBP3Q8TAT2 258 aa13.94□□□□□ -0.18
GPC1-207ENST00000466624 CYGBQ8WWM9 190 aa13.94□□□□□ -0.18
GPC1-207ENST00000466624 FBXO17Q96EF6 278 aa13.94□□□□□ -0.18
GPC1-207ENST00000466624 FOXN4Q96NZ1 517 aa13.94□□□□□ -0.18
GPC1-207ENST00000466624 IL4I1Q96RQ9 567 aa13.94□□□□□ -0.18
GPC1-207ENST00000466624 EMC7Q9NPA0 242 aa13.94□□□□□ -0.18
GPC1-207ENST00000466624 H2AFY2Q9P0M6 372 aaPredicted RBP13.94□□□□□ -0.18
GPC1-207ENST00000466624 TIMM10BQ9Y5J6 103 aa13.94□□□□□ -0.18
GPC1-207ENST00000466624 COMMD3-BMI1R4GMX3 469 aa13.94□□□□□ -0.18
GPC1-207ENST00000466624 HEATR1Q9H583 2144 aaKnown RBP13.93□□□□□ -0.18
GPC1-207ENST00000466624 FAM221AA4D161 298 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 CCDC182A6NF36 153 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 GPANK1O95872 356 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 ZNF823P16415 610 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 ZNF32P17041 273 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 GABRB1P18505 474 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 PTAFRP25105 342 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 GSTT1P30711 240 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 HSPA13P48723 471 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 AQP4P55087 323 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 HIST1H3AP68431 136 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 SCRN3Q0VDG4 424 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 DBPQ10586 325 aaPredicted RBP13.93□□□□□ -0.18
GPC1-207ENST00000466624 TMED1Q13445 227 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 APOFQ13790 326 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 GGTLC2Q14390 218 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 OCLNQ16625 522 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 KLHL12Q53G59 568 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 NCMAPQ5T1S8 102 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 HIST2H3PS2Q5TEC6 136 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 ZNF691Q5VV52 312 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 FBXW10Q5XX13 1052 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 TMEM108Q6UXF1 575 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 HIST2H3AQ71DI3 136 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 MEPCEQ7L2J0 689 aaKnown RBP13.93□□□□□ -0.18
GPC1-207ENST00000466624 ENTHD1Q8IYW4 607 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 SETD9Q8NE22 299 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 RHOXF1Q8NHV9 184 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 TFAP2CQ92754 450 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 RFKQ969G6 155 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 TEAD3Q99594 435 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 C1orf198Q9H425 327 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 ESRP2Q9H6T0 727 aaKnown RBP13.93□□□□□ -0.18
GPC1-207ENST00000466624 RNF121Q9H920 327 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 NOX3Q9HBY0 568 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 HAO2Q9NYQ3 351 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 CYB5R1Q9UHQ9 305 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 HSPE1-MOB4S4R3N1 261 aa13.93□□□□□ -0.18
GPC1-207ENST00000466624 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.92□□□□□ -0.18
GPC1-207ENST00000466624 A6NNC1 897 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 DEFB108AA8MXU0 73 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 TMCC2O75069 709 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 PTHP01270 115 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 SERPINA5P05154 406 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 ZNF14P17017 642 aaPredicted RBP13.92□□□□□ -0.18
GPC1-207ENST00000466624 COL8A1P27658 744 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 ENTPD1P49961 510 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 ZNF83P51522 516 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 RPS7P62081 194 aaKnown RBP13.92□□□□□ -0.18
GPC1-207ENST00000466624 ADAM8P78325 824 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 PIGFQ07326 219 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 MEP1BQ16820 701 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 TIGD4Q8IY51 512 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 ZNF511Q8NB15 262 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 GJC3Q8NFK1 279 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 IL17RDQ8NFM7 739 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 C14orf79Q96F83 325 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 ZNF582Q96NG8 517 aaPredicted RBP13.92□□□□□ -0.18
GPC1-207ENST00000466624 INTS14Q96SY0 518 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 OR2H1Q9GZK4 316 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 ASH2LQ9UBL3 628 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 WARS2Q9UGM6 360 aaKnown RBP13.92□□□□□ -0.18
GPC1-207ENST00000466624 ATPIF1Q9UII2 106 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 POLR1DQ9Y2S0 133 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 LHFPL6Q9Y693 200 aa13.92□□□□□ -0.18
GPC1-207ENST00000466624 IGHV1-18A0A0C4DH31 117 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 TVP23AA6NH52 213 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 SNTNA6NMZ2 147 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 M0R1B8 84 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 SIAH2O43255 324 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 PATE4P0C8F1 98 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 COX5BP10606 129 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 CD40P25942 277 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 LOXP28300 417 aaPredicted RBP13.91□□□□□ -0.18
GPC1-207ENST00000466624 HTR1FP30939 366 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 CDH11P55287 796 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 PSG4Q00888 419 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 PLP2Q04941 152 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 ALKBH2Q6NS38 261 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 SLC18B1Q6NT16 456 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 LYPD4Q6UWN0 246 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 IZUMO2Q6UXV1 221 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 USP51Q70EK9 711 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 SHFQ7M4L6 423 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 BCDIN3DQ7Z5W3 292 aaKnown RBP13.91□□□□□ -0.18
GPC1-207ENST00000466624 ALDH16A1Q8IZ83 802 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 UBE2FQ969M7 185 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 ZMYND19Q96E35 227 aaPredicted RBP13.91□□□□□ -0.18
GPC1-207ENST00000466624 PLPPR2Q96GM1 343 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms