RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CT45A7P0DMV0 189 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 GSTM3P21266 225 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 DCKP27707 260 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 CEACAM6P40199 344 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 EIF3EP60228 445 aaKnown RBP2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 GINS1Q14691 196 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 TRAM2Q15035 370 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 QPRTQ15274 297 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 UBE2SQ16763 222 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 KCTD19Q17RG1 926 aaPredicted RBP2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 BEX5Q5H9J7 111 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 CT45A1Q5HYN5 189 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 HES5Q5TA89 166 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 AGBL2Q5U5Z8 902 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 UBE2UQ5VVX9 321 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 Q6P435 159 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 NPSR1Q6W5P4 371 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 SAXO1Q8IYX7 474 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 TTC29Q8NA56 475 aaPredicted RBP2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR5B3Q8NH48 314 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 CT45A3Q8NHU0 189 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 IL22RA2Q969J5 263 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 CEP170P1Q96L14 293 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR5B12Q96R08 314 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 SDHCQ99643 169 aaPredicted RBP2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 NTN4Q9HB63 628 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 MRPS30Q9NP92 439 aaKnown RBP2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR12D3Q9UGF7 316 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 PSG8Q9UQ74 426 aa2.8□□□□□ -1.96
CDC42BPA-211ENST00000466538 MN1Q10571 1320 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 WDR19Q8NEZ3 1342 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 IGHV3-74A0A0B4J1X5 117 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 CIB4A0PJX0 185 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 SMKR1H3BMG3 65 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 SCAMP2O15127 329 aaKnown RBP2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 CASC3O15234 703 aaKnown RBP2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 NUPL2O15504 423 aaKnown RBP2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 ANGPTL7O43827 346 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 CD5LO43866 347 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 FKBP6O75344 327 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 SPAG7O75391 227 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 CCNB2O95067 398 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 FABP3P05413 133 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 ASGR1P07306 291 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 TNFSF9P41273 254 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 NAMPTP43490 491 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 CSNK1EP49674 416 aaKnown RBP2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 UCNP55089 124 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 ZSCAN26Q16670 478 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 DUX4L9Q6RFH8 374 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 OTUD6AQ7L8S5 288 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 ENTHD1Q8IYW4 607 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 OTUD6BQ8N6M0 293 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 CAPSLQ8WWF8 208 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 STARD8Q92502 1023 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 GALNT14Q96FL9 552 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 SLC25A2Q9BXI2 301 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 CLSTN2Q9H4D0 955 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 ELOVL6Q9H5J4 265 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 RPP21Q9H633 154 aaKnown RBP2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 NOX3Q9HBY0 568 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 SLC40A1Q9NP59 571 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 TMEM9BQ9NQ34 198 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 PTTG3PQ9NZH4 202 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 TBX21Q9UL17 535 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 ST3GAL6Q9Y274 331 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 SAR1BQ9Y6B6 198 aa2.79□□□□□ -1.96
CDC42BPA-211ENST00000466538 PRRC2AP48634 2157 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 MTCL1Q9Y4B5 1905 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 IGLV3-16A0A075B6K0 115 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 IGHV5-51A0A0C4DH38 117 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 INS-IGF2F8WCM5 200 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 BOLA2-SMG1P6H3BVE0 249 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 DNAJB6O75190 326 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 AQP8O94778 261 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR8G3PP0DMU2 310 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR5H8P0DN80 308 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 MAS1LP35410 378 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 LONP1P36776 959 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 CSNK1A1P48729 337 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 ARG2P78540 354 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 SP4Q02446 784 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 IFT88Q13099 833 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 MAB21L1Q13394 359 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 PSMD5Q16401 504 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 C1orf185Q5T7R7 199 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 ARL9Q6T311 187 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 CLEC2AQ6UVW9 174 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 FAM92BQ6ZTR7 304 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 C12orf56Q8IXR9 622 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 JAGN1Q8N5M9 183 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 BPIFCQ8NFQ6 507 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR9G4Q8NGQ1 327 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 OR5K2Q8NHB8 316 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 AGR3Q8TD06 166 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 EEF1AKMT3Q96AZ1 226 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 ECHDC3Q96DC8 303 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 BMFQ96LC9 184 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 PRRC1Q96M27 445 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms