RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GRNP28799 593 aaKnown RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 NAA10P41227 235 aaPredicted RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 ENTPD1P49961 510 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 HIST1H3AP68431 136 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 MED21Q13503 144 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 SGCAQ16586 387 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 HIST2H3PS2Q5TEC6 136 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 OR7E24Q6IFN5 339 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 KRT80Q6KB66 452 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 SEZ6L2Q6UXD5 910 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 HIST2H3AQ71DI3 136 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 SLC16A9Q7RTY1 509 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 CDC20BQ86Y33 519 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 ERI1Q8IV48 349 aaKnown RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 OR51G2Q8NGK0 314 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 SIGLEC11Q96RL6 698 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 INTS14Q96SY0 518 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 CNN2Q99439 309 aaKnown RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 HDHD5Q9BXW7 423 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 NOX3Q9HBY0 568 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 FGF20Q9NP95 211 aaPredicted RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 KCNJ16Q9NPI9 418 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 NPDC1Q9NQX5 325 aaPredicted RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 SLC17A5Q9NRA2 495 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 PAK1IP1Q9NWT1 392 aaPredicted RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 B3GNT2Q9NY97 397 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 CYB5R1Q9UHQ9 305 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 PSORS1C1Q9UIG5 152 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 KCNG2Q9UJ96 466 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 EXOGQ9Y2C4 368 aaKnown RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 LRCH1Q9Y2L9 728 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 KLHDC2Q9Y2U9 406 aa9.74□□□□□ -0.85
VCP-204ENST00000466100 RPL36Q9Y3U8 105 aaKnown RBP9.74□□□□□ -0.85
VCP-204ENST00000466100 DOPEY2Q9Y3R5 2298 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 CIB4A0PJX0 185 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 SNTNA6NMZ2 147 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 C16orf97H3BN30 126 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 FARS2O95363 451 aaKnown RBP9.73□□□□□ -0.85
VCP-204ENST00000466100 WNT11O96014 354 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 IGHA1P01876 353 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 HLA-DQA2P01906 255 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 PIPP12273 146 aaPredicted RBP9.73□□□□□ -0.85
VCP-204ENST00000466100 HOXB1P14653 301 aaPredicted RBP9.73□□□□□ -0.85
VCP-204ENST00000466100 IL32P24001 234 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 CRHBPP24387 322 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 RPS27P42677 84 aaKnown RBP9.73□□□□□ -0.85
VCP-204ENST00000466100 ADAM8P78325 824 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 SORDQ00796 357 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 RAB40BQ12829 278 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 POU4F2Q12837 409 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 AQP6Q13520 282 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 TIMM23BQ5SRD1 257 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 SLC18B1Q6NT16 456 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 C22orf34Q6ZV56 151 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 SHFQ7M4L6 423 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 DPY19L4Q7Z388 723 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.73□□□□□ -0.85
VCP-204ENST00000466100 SYT9Q86SS6 491 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 LINC00346Q8IVM7 164 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 LRRC18Q8N456 261 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 RFLNBQ8N5W9 214 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 BPIFB6Q8NFQ5 453 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 STEAP2Q8NFT2 490 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 OR10H5Q8NGA6 315 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 OR4F15Q8NGB8 312 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 OR52I1Q8NGK6 324 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 OR10S1Q8NGN2 331 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 OTOSQ8NHW6 89 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 ST7LQ8TDW4 575 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 SMAP2Q8WU79 429 aaPredicted RBP9.73□□□□□ -0.85
VCP-204ENST00000466100 SGCDQ92629 289 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 GGHQ92820 318 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 S100PBPQ96BU1 408 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 ZNF75AQ96N20 296 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 AMELYQ99218 206 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 ZNF649Q9BS31 505 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 WACQ9BTA9 647 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 JAM3Q9BX67 310 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 YIPF3Q9GZM5 350 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 ACTR6Q9GZN1 396 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 OBP2BQ9NPH6 170 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 CNOT2Q9NZN8 540 aaKnown RBP9.73□□□□□ -0.85
VCP-204ENST00000466100 ASH2LQ9UBL3 628 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 COPS3Q9UNS2 423 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 SLC25A15Q9Y619 301 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 ABCA4P78363 2273 aa9.73□□□□□ -0.85
VCP-204ENST00000466100 PKDREJQ9NTG1 2253 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 TRIM64A6NGJ6 449 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 C12orf71A8MTZ7 269 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 PRR32B1ATL7 298 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 ZNF593O00488 134 aaPredicted RBP9.72□□□□□ -0.85
VCP-204ENST00000466100 AGFG2O95081 481 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 HLA-HP01893 362 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 THBDP07204 575 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 PATE4P0C8F1 98 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 ZNF823P16415 610 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 ZNF32P17041 273 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 IGFBP2P18065 325 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 GUCA1AP43080 201 aaPredicted RBP9.72□□□□□ -0.85
VCP-204ENST00000466100 HCCSP53701 268 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms