RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ZNF718Q3SXZ3 478 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 AWAT1Q58HT5 328 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 UNQ6126/PRO20091Q6UXV3 157 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 RBM45Q8IUH3 476 aaKnown RBP16.8■□□□□ 0.28
VARS-221ENST00000463184 ZDHHC22Q8N966 263 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 CPEB3Q8NE35 698 aaKnown RBP16.8■□□□□ 0.28
VARS-221ENST00000463184 NOXO1Q8NFA2 376 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 OR4D11Q8NGI4 311 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 CCL17Q92583 94 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 THTPAQ9BU02 230 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 PCDHAC1Q9H158 963 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 SIAEQ9HAT2 523 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 NTN4Q9HB63 628 aa16.8■□□□□ 0.28
VARS-221ENST00000463184 DCAF13Q9NV06 445 aaKnown RBP16.8■□□□□ 0.28
VARS-221ENST00000463184 EIF3KQ9UBQ5 218 aaKnown RBP16.8■□□□□ 0.28
VARS-221ENST00000463184 MCIDASD6RGH6 385 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 ARPC2O15144 300 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 ACADSP16219 412 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 CCNOP22674 350 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 STOMP27105 288 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 PABPC1L2AQ5JQF8 200 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 C10orf128Q5T292 105 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 C1orf174Q8IYL3 243 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 SYT14Q8NB59 555 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 NSMCE2Q96MF7 247 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 GAL3ST1Q99999 423 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 MUC13Q9H3R2 512 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 CCNB1IP1Q9NPC3 277 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 ESM1Q9NQ30 184 aa16.79■□□□□ 0.28
VARS-221ENST00000463184 STX18Q9P2W9 335 aaKnown RBP16.79■□□□□ 0.28
VARS-221ENST00000463184 SAMD4AQ9UPU9 718 aaKnown RBP16.79■□□□□ 0.28
VARS-221ENST00000463184 PLSCR5A0PG75 271 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 SPRY3O43610 288 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 TRMUO75648 421 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 PRSS23O95084 383 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 IGHV1-46P01743 117 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 F13BP05160 661 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 TNFRSF1BP20333 461 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 MAKP20794 623 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 LIPAP38571 399 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 DAP3P51398 398 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 MMP15P51511 669 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 UGT2B15P54855 530 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 MRPS34P82930 218 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 RPL18Q07020 188 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 TRIM25Q14258 630 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 IFI44LQ53G44 452 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 MBNL2Q5VZF2 373 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 FKBP9P1Q75LS8 142 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 VTCN1Q7Z7D3 282 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 TSPYL5Q86VY4 417 aaPredicted RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 GEMIN6Q8WXD5 167 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 ASB10Q8WXI3 467 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 MARS2Q96GW9 593 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 HSH2DQ96JZ2 352 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 POM121L2Q96KW2 1035 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 PRSS27Q9BQR3 290 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 POLR2J2Q9GZM3 115 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 EGLN1Q9GZT9 426 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 POLR2J3Q9H1A7 115 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 MEPEQ9NQ76 525 aaPredicted RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 CYSLTR2Q9NS75 346 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 DDX28Q9NUL7 540 aaKnown RBP16.78■□□□□ 0.28
VARS-221ENST00000463184 ACTR3BQ9P1U1 418 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 OPN4Q9UHM6 478 aa16.78■□□□□ 0.28
VARS-221ENST00000463184 PPIAL4EA0A075B759 164 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 PPIAL4CA0A0B4J2A2 164 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 PPIAL4DF5H284 164 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 EBAG9O00559 213 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 DNAJC8O75937 253 aaPredicted RBP16.77■□□□□ 0.28
VARS-221ENST00000463184 FSHBP01225 129 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 MT-ND1P03886 318 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 ADH4P08319 380 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 PPIAL4FP0DN26 164 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 FUT1P19526 365 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 OR1E2P47887 323 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 UBA52P62987 128 aaKnown RBP16.77■□□□□ 0.28
VARS-221ENST00000463184 THEM4Q5T1C6 240 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 CLPTM1LQ96KA5 538 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 SMURF2Q9HAU4 748 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 INIPQ9NRY2 104 aa16.77■□□□□ 0.28
VARS-221ENST00000463184 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.77■□□□□ 0.28
VARS-221ENST00000463184 ISPDA4D126 451 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 GSC2O15499 205 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 IGF2P01344 180 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 ZNF32P17041 273 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 WNT5AP41221 380 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 GDI2P50395 445 aaKnown RBP16.76■□□□□ 0.27
VARS-221ENST00000463184 FOXL1Q12952 345 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 SPATA46Q5T0L3 261 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 PGM2L1Q6PCE3 622 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 CCDC121Q6ZUS5 278 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 DHFR2Q86XF0 187 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 ZNF101Q8IZC7 436 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 SLC25A40Q8TBP6 338 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 KLF14Q8TD94 323 aaPredicted RBP16.76■□□□□ 0.27
VARS-221ENST00000463184 ST7LQ8TDW4 575 aa16.76■□□□□ 0.27
VARS-221ENST00000463184 IPCEF1Q8WWN9 437 aaPredicted RBP16.76■□□□□ 0.27
VARS-221ENST00000463184 DVL3Q92997 716 aaPredicted RBP16.76■□□□□ 0.27
VARS-221ENST00000463184 DIRC2Q96SL1 478 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms