RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ACHEP22303 614 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 IGFBP5P24593 272 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 CHN2P52757 468 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 FXYD6P3P58550 94 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 GLO1Q04760 184 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 RIN1Q13671 783 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 SPATS1Q496A3 300 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 ELFN2Q5R3F8 820 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 SPATA46Q5T0L3 261 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 GPR139Q6DWJ6 353 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 FAM166AQ6J272 317 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 ADCK1Q86TW2 530 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 ALDH16A1Q8IZ83 802 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 ZNF101Q8IZC7 436 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 C11orf40Q8WZ69 217 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 MSI2Q96DH6 328 aaKnown RBP8.71□□□□□ -1.02
SF3A3-204ENST00000462258 SNX18Q96RF0 628 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 FUZQ9BT04 418 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 SYT4Q9H2B2 425 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 OCEL1Q9H607 264 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 CHODLQ9H9P2 273 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 EMC7Q9NPA0 242 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 NRIP3Q9NQ35 241 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 TMEM160Q9NX00 188 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 SLCO1C1Q9NYB5 712 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 IL20RAQ9UHF4 553 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 GPR160Q9UJ42 338 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 KCNS2Q9ULS6 477 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 TIMM10BQ9Y5J6 103 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 LOC100289279A0A1B0GTE1 492 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 C12orf71A8MTZ7 269 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 C17orf100A8MU93 164 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 SOCS2O14508 198 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 OR10H3O60404 316 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 DOK2O60496 412 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 LMX1BO60663 402 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 PPP1R3DO95685 299 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 MT-ND5P03915 603 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 ATP6V1B2P21281 511 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 FPR3P25089 353 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 RRM2P31350 389 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 IL2RGP31785 369 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 MAGEB1P43366 347 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 RPS6KA3P51812 740 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 MNAT1P51948 309 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 SMIM11AP58511 58 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 SCRN3Q0VDG4 424 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 TRIP10Q15642 601 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 ZNF774Q6NX45 483 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 TMEM154Q6P9G4 183 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 SMARCD3Q6STE5 483 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 UGT2A3Q6UWM9 527 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 UNQ6126/PRO20091Q6UXV3 157 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 PTCHD4Q6ZW05 846 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 SYT9Q86SS6 491 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 FITM2Q8N6M3 262 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 ABHD4Q8TB40 342 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 IPCEF1Q8WWN9 437 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-204ENST00000462258 RDH5Q92781 318 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 GPA33Q99795 319 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 SOX7Q9BT81 388 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 HINT3Q9NQE9 182 aaKnown RBP8.7□□□□□ -1.02
SF3A3-204ENST00000462258 VSX1Q9NZR4 365 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-204ENST00000462258 EIF3KQ9UBQ5 218 aaKnown RBP8.7□□□□□ -1.02
SF3A3-204ENST00000462258 LPAR3Q9UBY5 353 aa8.7□□□□□ -1.02
SF3A3-204ENST00000462258 NDRG4Q9ULP0 352 aaKnown RBP8.7□□□□□ -1.02
SF3A3-204ENST00000462258 ATRQ13535 2644 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 H3BSA7 217 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 IMPA2O14732 288 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 SLC16A7O60669 478 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 ICMTO60725 284 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 LILRA1O75019 489 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 PTP4A3O75365 173 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 KHDRBS3O75525 346 aaKnown RBP8.69□□□□□ -1.02
SF3A3-204ENST00000462258 ABHD16AO95870 558 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 TXNDC12O95881 172 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 IGHV3-13P01766 116 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 SCG5P05408 212 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 FAM157CP0CG43 387 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 GCH1P30793 250 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 SLC6A6P31641 620 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 MPV17P39210 176 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 GPR6P46095 362 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-204ENST00000462258 HTR5AP47898 357 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 MRPS11P82912 194 aaKnown RBP8.69□□□□□ -1.02
SF3A3-204ENST00000462258 AQP6Q13520 282 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 CCNIQ14094 377 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 PCGF3Q3KNV8 242 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 ZNF718Q3SXZ3 478 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 TMEM255AQ5JRV8 349 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 DNM1P34Q6PK57 102 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 CYP2R1Q6VVX0 501 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 DPY19L2P2Q6ZN68 376 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 ZER1Q7Z7L7 766 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 ZDHHC21Q8IVQ6 265 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 GLB1L2Q8IW92 636 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 SLC25A40Q8TBP6 338 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 GTF3AQ92664 365 aaKnown RBP8.69□□□□□ -1.02
SF3A3-204ENST00000462258 HPS1Q92902 700 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 YIPF5Q969M3 257 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms