RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 KLBQ86Z14 1044 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 MUC20Q8N307 709 aaPredicted RBP11.5□□□□□ -0.57
PABPC4-208ENST00000461578 GOLGA6L1Q8N7Z2 621 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 ASB10Q8WXI3 467 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 NABP1Q96AH0 204 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 ZBTB9Q96C00 473 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 THOC1Q96FV9 657 aaKnown RBP11.5□□□□□ -0.57
PABPC4-208ENST00000461578 C4orf45Q96LM5 186 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 ZNF607Q96SK3 696 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 SLC30A2Q9BRI3 323 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 MRPL13Q9BYD1 178 aaKnown RBP11.5□□□□□ -0.57
PABPC4-208ENST00000461578 OR2H1Q9GZK4 316 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 WNT5BQ9H1J7 359 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 POFUT1Q9H488 388 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 SLC25A37Q9NYZ2 338 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 ZNF229Q9UJW7 825 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 ANGPT4Q9Y264 503 aa11.5□□□□□ -0.57
PABPC4-208ENST00000461578 TMEM178BH3BS89 294 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 H3BSA7 217 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 FMO6PO60774 539 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 PRB2P02812 416 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-208ENST00000461578 OPN1SWP03999 348 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 THY1P04216 161 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 ASAH2BP0C7U1 165 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 ACADSP16219 412 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 SLC6A2P23975 617 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 MMP16P51512 607 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 FGF12P61328 243 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 RPL18Q07020 188 aaKnown RBP11.49□□□□□ -0.57
PABPC4-208ENST00000461578 CD47Q08722 323 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 HLXQ14774 488 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-208ENST00000461578 NPTX1Q15818 432 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 C10orf128Q5T292 105 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 GPR157Q5UAW9 335 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 ZER1Q7Z7L7 766 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 MSRB3Q8IXL7 192 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 VANGL1Q8TAA9 524 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-208ENST00000461578 ZNF420Q8TAQ5 688 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-208ENST00000461578 OR2V2Q96R30 315 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 NUDT16L1Q9BRJ7 211 aaKnown RBP11.49□□□□□ -0.57
PABPC4-208ENST00000461578 PRDM13Q9H4Q3 707 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 ELOVL3Q9HB03 270 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 TCF7L1Q9HCS4 588 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 KCNK9Q9NPC2 374 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 SDR39U1Q9NRG7 319 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-208ENST00000461578 SLAMF8Q9P0V8 285 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 ASH2LQ9UBL3 628 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 SLC7A7Q9UM01 511 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 UGT2A1Q9Y4X1 527 aa11.49□□□□□ -0.57
PABPC4-208ENST00000461578 DOCK11Q5JSL3 2073 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 IGHV3-64DA0A0J9YX35 117 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 UBDO15205 165 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 SERPINB7O75635 380 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 LYPD3O95274 346 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 ABHD16AO95870 558 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 CYB5R3P00387 301 aaPredicted RBP11.48□□□□□ -0.57
PABPC4-208ENST00000461578 MELTFP08582 738 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 GSTM3P21266 225 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 UGT2B15P54855 530 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 MPP2Q14168 576 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 PDCD1Q15116 288 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 KRT71Q3SY84 523 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 FAM205BPQ63HN1 556 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 SLC27A4Q6P1M0 643 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 RBM45Q8IUH3 476 aaKnown RBP11.48□□□□□ -0.57
PABPC4-208ENST00000461578 C1orf174Q8IYL3 243 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 ALDH16A1Q8IZ83 802 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 OR6T1Q8NGN1 323 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 LINC01006Q8NI28 216 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 ADAMTS16Q8TE57 1224 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.48□□□□□ -0.57
PABPC4-208ENST00000461578 PLEKHA8Q96JA3 519 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 SEPHS2Q99611 448 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 NOX4Q9NPH5 578 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 INIPQ9NRY2 104 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.48□□□□□ -0.57
PABPC4-208ENST00000461578 IL19Q9UHD0 177 aa11.48□□□□□ -0.57
PABPC4-208ENST00000461578 KIR2DS1A0A191URI9 304 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 G3V4G9 280 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 RGS16O15492 202 aaPredicted RBP11.47□□□□□ -0.57
PABPC4-208ENST00000461578 ERLIN1O75477 346 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 LAP3P28838 519 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 AQP2P41181 271 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 ERFP50548 548 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 DAP3P51398 398 aaKnown RBP11.47□□□□□ -0.57
PABPC4-208ENST00000461578 ZNF133P52736 654 aaPredicted RBP11.47□□□□□ -0.57
PABPC4-208ENST00000461578 PCBP3P57721 371 aaKnown RBP11.47□□□□□ -0.57
PABPC4-208ENST00000461578 DUSP7Q16829 419 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 TTMPQ5BVD1 217 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 ZNF620Q6ZNG0 422 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 HDDC2Q7Z4H3 204 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 TSPYL5Q86VY4 417 aaPredicted RBP11.47□□□□□ -0.57
PABPC4-208ENST00000461578 OR5AS1Q8N127 324 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 ANKRD42Q8N9B4 389 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 ATG16L2Q8NAA4 619 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 OR8B3Q8NGG8 313 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 HDAC2Q92769 488 aaKnown RBP11.47□□□□□ -0.57
PABPC4-208ENST00000461578 DACT3Q96B18 629 aaPredicted RBP11.47□□□□□ -0.57
PABPC4-208ENST00000461578 CMBLQ96DG6 245 aa11.47□□□□□ -0.57
PABPC4-208ENST00000461578 NEIL1Q96FI4 390 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms