RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 CTNSO60931 367 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 SULT1C4O75897 302 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 RAF1P04049 648 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 ALDOCP09972 364 aaKnown RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 ATXN1LP0C7T5 689 aaKnown RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 Q6ZPB1 254 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 LRRTM3Q86VH5 581 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 CELF2-AS1Q8N7Q2 184 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM255BQ8WV15 326 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 PCNPQ8WW12 178 aaKnown RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 DCBLD2Q96PD2 775 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 CSF3RQ99062 836 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 KCNG2Q9UJ96 466 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 LAMP3Q9UQV4 416 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 POMT1Q9Y6A1 747 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 TPOP07202 933 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 CPEP16870 476 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 USF1P22415 310 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ARR3P36575 388 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 SLC6A11P48066 632 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 TPPP2P59282 170 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 GPR85P60893 370 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 LYRM7Q5U5X0 104 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF787Q6DD87 383 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ADAMTSL4Q6UY14 1074 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 TTC9BQ8N6N2 239 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 L3MBTL4Q8NA19 623 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 SLC38A9Q8NBW4 561 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 NAA50Q9GZZ1 169 aaKnown RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 FLVCR1Q9Y5Y0 555 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 TLCD2A6NGC4 264 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 VAMP5O95183 116 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 C1QBP02746 253 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 HNRNPA3P51991 378 aaKnown RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 TPBGQ13641 420 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 SYT6Q5T7P8 510 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 MFSD12Q6NUT3 480 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 LINC00696Q6ZRV3 163 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ZPBPQ9BS86 351 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 NSG2Q9Y328 171 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 AQP7P3A6NL99 342 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 SCO1O75880 301 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 SLC10A3P09131 477 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 RGRP47804 291 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ERVFC1P60507 584 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 FABP9Q0Z7S8 132 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 HAGHQ16775 308 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 PDZD11Q5EBL8 140 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 FBXO46Q6PJ61 603 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 COMMD5Q9GZQ3 224 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 C12orf49Q9H741 205 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 FBXO8Q9NRD0 319 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 LANCL2Q9NS86 450 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 NDUFB11Q9NX14 153 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 LHX3Q9UBR4 397 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 IGKV6D-21A0A0A0MT36 114 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 SELENOFO60613 162 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 CD1EP15812 388 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 CALCRP30988 508 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 SPANXN5Q5MJ07 72 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 AGBL4Q5VU57 503 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 FCRL6Q6DN72 434 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF485Q8NCK3 441 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 DYNC2LI1Q8TCX1 351 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 LHX4Q969G2 390 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ARHGDIGQ99819 225 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF2Q9BSG1 426 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 GSX2Q9BZM3 304 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 TIMM10BQ9Y5J6 103 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 TRIM77I1YAP6 450 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 DCTN6O00399 190 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 GFRA2O00451 464 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 OR7C2O60412 319 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ALOX12BO75342 701 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 PIPP12273 146 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 RAD52P43351 418 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 PXNP49023 591 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 CNN1P51911 297 aaKnown RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 HSF5Q4G112 596 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 YOD1Q5VVQ6 348 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-205ENST00000461221 SLC48A1Q6P1K1 146 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 LINC00299Q6ZSB3 139 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 LYSMD2Q8IV50 215 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 ASB13Q8WXK3 278 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 C1QTNF3Q9BXJ4 246 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 GPR173Q9NS66 373 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 KIDINS220Q9ULH0 1771 aa8.25□□□□□ -1.09
BRCA1-205ENST00000461221 RFPL4AA6NLU0 287 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 HSPB2A8KAH6 182 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 RFPL4AL1F8VTS6 287 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 FCGR2CP31995 323 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 HSPB2Q16082 182 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 RNF212Q495C1 297 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 EMC4Q5J8M3 183 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 NECAP1Q8NC96 275 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF384Q8TF68 577 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 FGF13Q92913 245 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM230Q96A57 120 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 TM4SF18Q96CE8 201 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 RASD2Q96D21 266 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms