RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 KRR1Q13601 381 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 MELKQ14680 651 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 SNAPC1Q16533 368 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 C6orf141Q5SZD1 244 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 SLC35F1Q5T1Q4 408 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 C12orf73Q69YU5 71 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 LINGO2Q7L985 606 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 SSX8Q7RTT4 187 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 ADCK1Q86TW2 530 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 POMGNT2Q8NAT1 580 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 ZFAND2BQ8WV99 257 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 TRMT61AQ96FX7 289 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 SLC25A44Q96H78 314 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 TXNDC15Q96J42 360 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 PITX2Q99697 317 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 TRAF4Q9BUZ4 470 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 SCN3BQ9NY72 215 aa14.87□□□□□ -0.03
PRPF40A-204ENST00000450303 NIPBLQ6KC79 2804 aaeCLIP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 ZNF701M0R085 212 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 MPZL2O60487 215 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 TMCC2O75069 709 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 SLC43A1O75387 559 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 PAICSP22234 425 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 PTAFRP25105 342 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 EPHA2P29317 976 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 CLRN1P58418 232 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 DYNC1I2Q13409 638 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 ARMC4Q5T2S8 1044 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 NHLRC1Q6VVB1 395 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 B3GLCTQ6Y288 498 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 C1orf162Q8NEQ5 155 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 OR52E2Q8NGJ4 325 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 ZNF519Q8TB69 540 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 FAM81AQ8TBF8 368 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 TRUB1Q8WWH5 349 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 ZNF566Q969W8 418 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 ALKBH3Q96Q83 286 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 SNX18Q96RF0 628 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 ALG12Q9BV10 488 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 EMC6Q9BV81 110 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 RBM38Q9H0Z9 239 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 B3GAT2Q9NPZ5 323 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 CMC2Q9NRP2 79 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 GDF2Q9UK05 429 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 NDRG4Q9ULP0 352 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 AMDHD2Q9Y303 409 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 TPRKBQ9Y3C4 175 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 ATP23Q9Y6H3 246 aa14.86□□□□□ -0.03
PRPF40A-204ENST00000450303 PLCE1Q9P212 2302 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 SURF4O15260 269 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 TRMUO75648 421 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 CCDC159P0C7I6 412 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 HIST1H1CP16403 213 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 CSNK2BP67870 215 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 TNK1Q13470 666 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 CAMK2DQ13557 499 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 CLEC12BQ2HXU8 276 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 PTCHD4Q6ZW05 846 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 ABHD12BQ7Z5M8 362 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 C17orf78Q8N4C9 275 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 OR1K1Q8NGR3 316 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 OR6N1Q8NGY5 312 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 OR4K13Q8NH42 304 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 RASD2Q96D21 266 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 NMD3Q96D46 503 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 RADILQ96JH8 1075 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 LRR1Q96L50 414 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 RBP7Q96R05 134 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 FN3KQ9H479 309 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 H2AFY2Q9P0M6 372 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 CEPT1Q9Y6K0 416 aa14.85□□□□□ -0.03
PRPF40A-204ENST00000450303 ALPK2Q86TB3 2170 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 A0A096LPE4 126 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 A0A1W2PPZ6 126 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 ZNF587BE7ETH6 402 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 PRR23D1E9PI22 279 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 E9PQ18 207 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 MRPS14O60783 128 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 IGHV4-39P01824 125 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 HEXAP06865 529 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 PRR23D2P0DMB1 279 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 JUNBP17275 347 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 CSNK1A1P48729 337 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 FABP6P51161 128 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 TUBA1BP68363 451 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 ROR2Q01974 943 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 CD47Q08722 323 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 TBRG1Q3YBR2 411 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 MESTQ5EB52 335 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 LEG1Q6P5S2 330 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 DNM1P34Q6PK57 102 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 KLHL24Q6TFL4 600 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 KCTD8Q6ZWB6 473 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 TUBA1AQ71U36 451 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 GPR137CQ8N3F9 429 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 TCEANCQ8N8B7 351 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 OR8J1Q8NGP2 316 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 ZNF420Q8TAQ5 688 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 OR2M2Q96R28 347 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms