RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ACTBL2Q562R1 376 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF585AQ6P3V2 769 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 ETFBKMTQ8IXQ9 262 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 SLC35F2Q8IXU6 374 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 HIST3H2BBQ8N257 126 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF480Q8WV37 535 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 SECTM1Q8WVN6 248 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 GLYATL1Q969I3 302 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 STACQ99469 402 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 LGR4Q9BXB1 951 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 DNAJB11Q9UBS4 358 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 ZDHHC8Q9ULC8 765 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 HDGFL3Q9Y3E1 203 aa17.38■□□□□ 0.37
HMGA1-205ENST00000447654 A0A1W2PPC1 479 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 GLCEO94923 617 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF735P0CB33 412 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 ADH6P28332 368 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 PPM1FP49593 454 aaPredicted RBP17.37■□□□□ 0.37
HMGA1-205ENST00000447654 TRA2BP62995 288 aaKnown RBP17.37■□□□□ 0.37
HMGA1-205ENST00000447654 TGM3Q08188 693 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 MEF2DQ14814 521 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 NR0B2Q15466 257 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 FAM78AQ5JUQ0 283 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 ALKBH2Q6NS38 261 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 OR7G2Q8NG99 324 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 OR56A1Q8NGH5 318 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 DPH1Q9BZG8 443 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 KCNG2Q9UJ96 466 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 TNRC18O15417 2968 aaPredicted RBP17.37■□□□□ 0.37
HMGA1-205ENST00000447654 C2orf16Q68DN1 1984 aa17.37■□□□□ 0.37
HMGA1-205ENST00000447654 MYO9BQ13459 2157 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF724A8MTY0 619 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 PLPP1O14494 284 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 CDC40O60508 579 aaKnown RBP eCLIP17.36■□□□□ 0.37
HMGA1-205ENST00000447654 AMY2AP04746 511 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 BSGP35613 385 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 GAGE1Q13065 139 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 ARHGAP11AQ6P4F7 1023 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 PSRC1Q6PGN9 363 aaPredicted RBP17.36■□□□□ 0.37
HMGA1-205ENST00000447654 RTL10Q7L3V2 364 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 KLK6Q92876 244 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 TIFAQ96CG3 184 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 AMDHD1Q96NU7 426 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 GAS2L1Q99501 681 aaPredicted RBP17.36■□□□□ 0.37
HMGA1-205ENST00000447654 PRRT1Q99946 306 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 RNF126Q9BV68 326 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 LHX9Q9NQ69 397 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 FBXO4Q9UKT5 387 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 TRAV18A0A075B6X5 111 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 ADAP1O75689 374 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF432O94892 652 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 PMP2P02689 132 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 FGF7P21781 194 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 PBLDP30039 288 aaPredicted RBP17.36■□□□□ 0.37
HMGA1-205ENST00000447654 GUCA2AQ02747 115 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 KHDRBS2Q5VWX1 349 aaKnown RBP17.36■□□□□ 0.37
HMGA1-205ENST00000447654 TMPRSS12Q86WS5 348 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 VRK2Q86Y07 508 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 CDK20Q8IZL9 346 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 CA5BP1Q8WTZ4 195 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 ARRDC3Q96B67 414 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 ADAM29Q9UKF5 820 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 SLC7A7Q9UM01 511 aa17.36■□□□□ 0.37
HMGA1-205ENST00000447654 SLC5A10A0PJK1 596 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 FRS3O43559 492 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 CA3P07451 260 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 ADRA2CP18825 462 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 TACR3P29371 465 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 HSD17B7P56937 341 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 C9orf64Q5T6V5 341 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 TMEM220Q6QAJ8 160 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 OLIG3Q7RTU3 272 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 SZRD1Q7Z422 152 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 C7orf61Q8IZ16 206 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 BPIFB2Q8N4F0 458 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 FRMD1Q8N878 549 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 OR8S1Q8NH09 359 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 SNIP1Q8TAD8 396 aaKnown RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 RHBGQ9H310 441 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 GLIPR2Q9H4G4 154 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 CCDC187A0A096LP49 1063 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 TRBV5-5A0A0J9YX44 114 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF726A6NNF4 738 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 OR1F1O43749 312 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 CRTAPO75718 401 aaPredicted RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 DUS4LO95620 317 aaKnown RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 DCNP07585 359 aaKnown RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 LINC00614P0C842 121 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 RPS10P46783 165 aaKnown RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 PRLHRP49683 370 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 TAS2R38P59533 333 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF658BQ4V348 819 aaPredicted RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 PRSS54Q6PEW0 395 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 RFLNBQ8N5W9 214 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 ZSCAN4Q8NAM6 433 aaPredicted RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF417Q8TAU3 575 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 RGP1Q92546 391 aaPredicted RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 THRSPQ92748 146 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 DVL3Q92997 716 aaPredicted RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 TMEM106CQ9BVX2 250 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms