RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SORCS2Q96PQ0 1159 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 VRK1Q99986 396 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-204ENST00000446876 SYT3Q9BQG1 590 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 MRPL37Q9BZE1 423 aaKnown RBP12.78□□□□□ -0.36
HDAC4-204ENST00000446876 LRMDAQ9H2I8 198 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 PLK3Q9H4B4 646 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 RPRD1BQ9NQG5 326 aaKnown RBP12.78□□□□□ -0.36
HDAC4-204ENST00000446876 ARMC1Q9NVT9 282 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 SPEF1Q9Y4P9 236 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 PMF1-BGLAPU3KQ54 211 aa12.78□□□□□ -0.36
HDAC4-204ENST00000446876 LOC100509620A0A075B734 347 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 IGLV1-36A0A0B4J1U3 117 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 OR6C68A6NDL8 312 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 FAM171A2A8MVW0 826 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 BHLHE40O14503 412 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 ATP5HO75947 161 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 RENP00797 406 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 STOMP27105 288 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 GLRXP35754 106 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 RASSF2P50749 326 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.77□□□□□ -0.37
HDAC4-204ENST00000446876 GLB1L2Q8IW92 636 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 OR6V1Q8N148 313 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 ZCCHC24Q8N2G6 241 aaKnown RBP12.77□□□□□ -0.37
HDAC4-204ENST00000446876 ZNF525Q8N782 197 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 CYB561A3Q8NBI2 242 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 ICA1LQ8NDH6 482 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 OR4Q3Q8NH05 313 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 C11orf40Q8WZ69 217 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 MRPL24Q96A35 216 aaKnown RBP12.77□□□□□ -0.37
HDAC4-204ENST00000446876 C18orf12Q96KH6 178 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 COX4I2Q96KJ9 171 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 POM121L2Q96KW2 1035 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 FEVQ99581 238 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 TSSK6Q9BXA6 273 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 DGCR6LQ9BY27 220 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 C1orf198Q9H425 327 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 BARX1Q9HBU1 254 aaPredicted RBP12.77□□□□□ -0.37
HDAC4-204ENST00000446876 SRA1Q9HD15 236 aaKnown RBP12.77□□□□□ -0.37
HDAC4-204ENST00000446876 IL20Q9NYY1 176 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 PDP1Q9P0J1 537 aaPredicted RBP12.77□□□□□ -0.37
HDAC4-204ENST00000446876 MYEF2Q9P2K5 600 aaKnown RBP12.77□□□□□ -0.37
HDAC4-204ENST00000446876 B9D1Q9UPM9 204 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 CMAHPQ9Y471 501 aa12.77□□□□□ -0.37
HDAC4-204ENST00000446876 C5orf49A4QMS7 147 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 C12orf71A8MTZ7 269 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 E2F6O75461 281 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 TIPRLO75663 272 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 SNAP29O95721 258 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 PTHP01270 115 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 INHBBP09529 407 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 GAAP10253 952 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 BMP4P12644 408 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 WNT5AP41221 380 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 PCBD1P61457 104 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 MAD2L1BPQ15013 274 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-204ENST00000446876 RPL13AP3Q6NVV1 102 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 DNM1P46Q6ZS02 220 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 MAPK1IP1LQ8NDC0 245 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 PAPD5Q8NDF8 572 aaKnown RBP12.76□□□□□ -0.37
HDAC4-204ENST00000446876 OR1J2Q8NGS2 313 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 DOK1Q99704 481 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 BDH2Q9BUT1 245 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 TIMM10BQ9Y5J6 103 aa12.76□□□□□ -0.37
HDAC4-204ENST00000446876 IGHV4-30-2A0A087WSY4 118 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 VSTM5A8MXK1 200 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 RNF223E7ERA6 249 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 IDH3BO43837 385 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 DOK2O60496 412 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 CLPTM1O96005 669 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 LCKP06239 509 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 GSTM3P21266 225 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 PRKACGP22612 351 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 CRABP1P29762 137 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 PYCR1P32322 319 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 ALDH3B1P43353 468 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 PPOXP50336 477 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 GDI2P50395 445 aaKnown RBP12.75□□□□□ -0.37
HDAC4-204ENST00000446876 RPS23P62266 143 aaKnown RBP12.75□□□□□ -0.37
HDAC4-204ENST00000446876 CCNIQ14094 377 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 SLC36A3Q495N2 470 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 SPATA46Q5T0L3 261 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 C1orf146Q5VVC0 180 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 RGS7BPQ6MZT1 257 aaPredicted RBP12.75□□□□□ -0.37
HDAC4-204ENST00000446876 DNM1P34Q6PK57 102 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 Q71RC1 249 aaPredicted RBP12.75□□□□□ -0.37
HDAC4-204ENST00000446876 ZNF101Q8IZC7 436 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 IQCF1Q8N6M8 205 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 NPEPL1Q8NDH3 523 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 SNX18Q96RF0 628 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 RACGAP1Q9H0H5 632 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 TPK1Q9H3S4 243 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 DYNLRB1Q9NP97 96 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 ASH2LQ9UBL3 628 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 DNAJB9Q9UBS3 223 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 POLR1DQ9Y2S0 133 aa12.75□□□□□ -0.37
HDAC4-204ENST00000446876 ARRDC5A6NEK1 342 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 SGCEO43556 437 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 TFP02787 698 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 ADRA2AP08913 450 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms