RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 KIR2DS4P43632 304 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 GABRA4P48169 554 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ACOT2P49753 483 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 TAS2R60P59551 318 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 DCDC1P59894 354 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RPL31P62899 125 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RPL19P84098 196 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 HMGCS1Q01581 520 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF91Q05481 1191 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RIPPLY1Q0D2K3 151 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 FCHO2Q0JRZ9 810 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 MFAP5Q13361 173 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 GGTLC2Q14390 218 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 LAGE3Q14657 143 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 KIR2DS1Q14954 304 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 SF3A2Q15428 464 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 TOMM34Q15785 309 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZIC1Q15915 447 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 PGGHGQ32M88 737 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 SLC9C1Q4G0N8 1177 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CYBRD1Q53TN4 286 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CARD16Q5EG05 197 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 TRIQKQ629K1 86 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 WDR25Q64LD2 544 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF544Q6NX49 715 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 FAHD2BQ6P2I3 314 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 DHRS4L2Q6PKH6 230 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ATRAIDQ6UW56 229 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMED4Q7Z7H5 227 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CMC1Q7Z7K0 106 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 MRPL52Q86TS9 123 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 DHFR2Q86XF0 187 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 LACC1Q8IV20 430 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 BLIDQ8IZY5 108 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 LGI3Q8N145 548 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CLIP4Q8N3C7 705 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 C15orf54Q8N8G6 183 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ATP6V0D2Q8N8Y2 350 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR10W1Q8NGF6 305 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR52N5Q8NH56 324 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 PHLDA1Q8WV24 401 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 IFT81Q8WYA0 676 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RAB3CQ96E17 227 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 FAHD2AQ96GK7 314 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 C4orf45Q96LM5 186 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF597Q96LX8 424 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 Q96MT0 163 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 GFM1Q96RP9 751 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CSF3RQ99062 836 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 GPR22Q99680 433 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF670Q9BS34 389 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 SLC35A5Q9BS91 424 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF2Q9BSG1 426 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 NUDT9Q9BW91 350 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 UGT2B28Q9BY64 529 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 SHARPINQ9H0F6 387 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ARL6Q9H0F7 186 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RNF41Q9H4P4 317 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CWH43Q9H720 699 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 PELI2Q9HAT8 420 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RHOFQ9HBH0 211 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RDH14Q9HBH5 336 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF334Q9HCZ1 680 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ABCC13Q9NSE7 274 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 MCUBQ9NWR8 336 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF446Q9NWS9 450 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 HRASLS2Q9NWW9 162 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 SDHAF2Q9NX18 166 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 GIN1Q9NXP7 522 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 AGO1Q9UL18 857 aaKnown RBP3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 RAB26Q9ULW5 256 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 KCNIP3Q9Y2W7 256 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 SLC22A7Q9Y694 548 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 MROH7Q68CQ1 1323 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 CCDC171Q6TFL3 1326 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 METP08581 1390 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 KIF24Q5T7B8 1368 aa3.07□□□□□ -1.92
HMGB1P12-201ENST00000438594 LY6G6EA0A0G2JKS1 128 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 KIR2DS5A0A0G2JLQ3 304 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 A0A1B0GW55 424 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 SYCE1LA8MT33 242 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 H3BMQ9 156 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 KIR2DS3K7RE56 304 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 EI24O14681 340 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 SLC31A2O15432 143 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ARPC5O15511 151 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 PRKNO60260 465 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 RAD1O60671 282 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 AQP8O94778 261 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 KRT75O95678 551 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 CRYZL1O95825 349 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 IFNA21P01568 189 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 HBE1P02100 147 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 C2P06681 752 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 CTSLP07711 333 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 HOXD4P09016 255 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 LINC00614P0C842 121 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 DUX4L2P0CJ85 424 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 DUX4L3P0CJ86 424 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 DUX4L4P0CJ87 422 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms