RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 KIRREL1Q96J84 757 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 LURAP1Q96LR2 239 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HSPA12BQ96MM6 686 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 EXO5Q9H790 373 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 NF1P21359 2839 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 CSF2RAP15509 400 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H1CP16403 213 aaKnown RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 SDHBP21912 280 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 POU3F4P49335 361 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 GSK3AP49840 483 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 CSNK1G2P78368 415 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 PRKCZQ05513 592 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 PHF19Q5T6S3 580 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 ABHD17CQ6PCB6 329 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 OR2A12Q8NGT7 310 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 GPR148Q8TDV2 347 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 CDS1Q92903 461 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 WDR77Q9BQA1 342 aaPredicted RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 SOX7Q9BT81 388 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 MRPL15Q9P015 296 aaKnown RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 CELSR1Q9NYQ6 3014 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 A0A087WV62 115 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 ZNF705EA8MWA4 302 aaPredicted RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 PRAMEF26H0Y7S4 382 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 CLDN4O14493 209 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 TAAR5O14804 337 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BKO60814 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 IL18BPO95998 194 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BJP06899 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 SFTPBP07988 381 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BOP23527 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BBP33778 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BDP58876 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BCP62807 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 SUPT4H1P63272 117 aaKnown RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST2H2BEQ16778 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 IZUMO1Q8IYV9 350 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HMGB4Q8WW32 186 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 FGF13Q92913 245 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BHQ93079 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 MUCL1Q96DR8 90 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 PRAP1Q96NZ9 151 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 S100A13Q99584 98 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BNQ99877 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BMQ99879 126 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 NDUFAF3Q9BU61 184 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 TMEM106CQ9BVX2 250 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 ZNF230Q9UIE0 474 aaPredicted RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 SLC13A4Q9UKG4 626 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 CACNA1AO00555 2505 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 METTL21EPA6NDL7 271 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 OR2AG2A6NM03 316 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 ZNF736B4DX44 427 aaPredicted RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 SEPT4O43236 478 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 LAMP2P13473 410 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 PGAM2P15259 253 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 ADPRHP54922 357 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 CLDN12P56749 244 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 DMWDQ09019 674 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 SPEM2Q0P670 501 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 ZNF750Q32MQ0 723 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 AMZ1Q400G9 498 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 TMEM205Q6UW68 189 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 C16orf58Q96GQ5 468 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 SLC41A2Q96JW4 573 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 PDGFDQ9GZP0 370 aaPredicted RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 CRYBG3Q68DQ2 2970 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 A0A0B4J2E0 115 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 A0A1B0GX12 115 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 A0A1W2PPK0 400 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 MSGN1A6NI15 193 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 CSNK2A2P19784 350 aaPredicted RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 FSTP19883 344 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 EGR3Q06889 387 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 JOSD1Q15040 202 aaPredicted RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 AGERQ15109 404 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 C22orf39Q6P5X5 142 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 ZNF765Q7L2R6 523 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 GABRG1Q8N1C3 465 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 OR51A4Q8NGJ6 313 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 DNASE2BQ8WZ79 361 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 SLAMF9Q96A28 289 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 IGSF21Q96ID5 467 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 CNN2Q99439 309 aaKnown RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 VRK1Q99986 396 aaPredicted RBP4.64□□□□□ -1.67
RIF1-203ENST00000428287 NRSN2Q9GZP1 204 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.64□□□□□ -1.671e-6■■■■□ 26.7
RIF1-203ENST00000428287 ANAPC10Q9UM13 185 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 DYRK1BQ9Y463 629 aa4.64□□□□□ -1.67
RIF1-203ENST00000428287 CPED1A4D0V7 1026 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 NDUFB2O95178 105 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 TACSTD2P09758 323 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 IGFBP3P17936 291 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 GABRR2P28476 465 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 SULT1A1P50225 295 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 REEP5Q00765 189 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 MRPL2Q5T653 305 aaKnown RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 GDF6Q6KF10 455 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 ZNF585AQ6P3V2 769 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms