RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 WACQ9BTA9 647 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 PRRG3Q9BZD7 231 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 GRIP2Q9C0E4 1043 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 TOR3AQ9H497 397 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 PLEKHF2Q9H8W4 249 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 MRPL22Q9NWU5 206 aaKnown RBP21.26■□□□□ 0.99
VEGFA-209ENST00000425836 FBXL3Q9UKT7 428 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 SHISA9B4DS77 424 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 E9PQ18 207 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 CASQ2O14958 399 aaPredicted RBP21.25■□□□□ 0.99
VEGFA-209ENST00000425836 SNAP29O95721 258 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 PABPC1L2AQ5JQF8 200 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 LINC01590Q5TEZ4 76 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 LYPD4Q6UWN0 246 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 KBTBD8Q8NFY9 601 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 LILRB1Q8NHL6 650 aaPredicted RBP21.25■□□□□ 0.99
VEGFA-209ENST00000425836 RADILQ96JH8 1075 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 OR2H1Q9GZK4 316 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 OR51V1Q9H2C8 321 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 UNC79Q9P2D8 2635 aa21.25■□□□□ 0.99
VEGFA-209ENST00000425836 TVP23AA6NH52 213 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 M0R129 80 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 CALCRP30988 508 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 SLC22A25Q6T423 547 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 CXXC5Q7LFL8 322 aaKnown RBP21.24■□□□□ 0.99
VEGFA-209ENST00000425836 GALNT4Q8N4A0 578 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 TCEANCQ8N8B7 351 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 ZNF511Q8NB15 262 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 CPEB3Q8NE35 698 aaKnown RBP21.24■□□□□ 0.99
VEGFA-209ENST00000425836 BBS1Q8NFJ9 593 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 AKR7LQ8NHP1 331 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 NEUROG1Q92886 237 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 WNT5BQ9H1J7 359 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 RNPEPL1Q9HAU8 725 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 ASH2LQ9UBL3 628 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 MOKQ9UQ07 419 aa21.24■□□□□ 0.99
VEGFA-209ENST00000425836 TLX2O43763 284 aaPredicted RBP21.23■□□□□ 0.99
VEGFA-209ENST00000425836 CRYAAP02489 173 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 FMO3P31513 532 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 PLP2Q04941 152 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 SLC34A1Q06495 639 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 AQP6Q13520 282 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 OGFRL1Q5TC84 451 aaPredicted RBP21.23■□□□□ 0.99
VEGFA-209ENST00000425836 IL17RDQ8NFM7 739 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 OR6K6Q8NGW6 343 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 AKAP1Q92667 903 aaKnown RBP eCLIP21.23■□□□□ 0.99
VEGFA-209ENST00000425836 HRASLS5Q96KN8 279 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 POLR1DQ9Y2S0 133 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 LHFPL6Q9Y693 200 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 IGHV2OR16-5A0A0B4J2B6 119 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 ATP6V1G2-DDX39BF2Z307 99 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 GGT2P36268 569 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 PACRGLQ8N7B6 248 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 OR10H5Q8NGA6 315 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 TMEM163Q8TC26 289 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 IL4I1Q96RQ9 567 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 KCNS3Q9BQ31 491 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 C8orf4Q9NR00 106 aa21.23■□□□□ 0.99
VEGFA-209ENST00000425836 IQCMA0A1B0GVH7 501 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 DLGAP1O14490 977 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 GLCEO94923 617 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 SLC2A5P22732 501 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 BLVRAP53004 296 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 SCRN3Q0VDG4 424 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 ZNF672Q499Z4 452 aaPredicted RBP21.22■□□□□ 0.99
VEGFA-209ENST00000425836 KLHL12Q53G59 568 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 ZNF774Q6NX45 483 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 DEPDC4Q8N2C3 294 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 SLC30A7Q8NEW0 376 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 WDR76Q9H967 626 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 CYB5R1Q9UHQ9 305 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 COMMD3-BMI1R4GMX3 469 aa21.22■□□□□ 0.99
VEGFA-209ENST00000425836 RER1O15258 196 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 PRODHO43272 600 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 PTHP01270 115 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 ZNF35P13682 527 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 ZNF823P16415 610 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 APEX1P27695 318 aaKnown RBP21.21■□□□□ 0.99
VEGFA-209ENST00000425836 CORO6Q6QEF8 472 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 BCDIN3DQ7Z5W3 292 aaKnown RBP21.21■□□□□ 0.99
VEGFA-209ENST00000425836 ALDH16A1Q8IZ83 802 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 NRGNQ92686 78 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 CDADC1Q9BWV3 514 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 SMPD3Q9NY59 655 aaPredicted RBP21.21■□□□□ 0.99
VEGFA-209ENST00000425836 KCNG2Q9UJ96 466 aa21.21■□□□□ 0.99
VEGFA-209ENST00000425836 CCL2P13500 99 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 CDH11P55287 796 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 CDC42P60953 191 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 HIST1H3AP68431 136 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 ADAM8P78325 824 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 SLC35D3Q5M8T2 416 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 HIST2H3PS2Q5TEC6 136 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 AADACL4Q5VUY2 407 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 SLC18B1Q6NT16 456 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 B3GLCTQ6Y288 498 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 HIST2H3AQ71DI3 136 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 LINC00346Q8IVM7 164 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 ZMYND19Q96E35 227 aaPredicted RBP21.2■□□□□ 0.98
VEGFA-209ENST00000425836 LURAP1Q96LR2 239 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 RDH12Q96NR8 316 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms