RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 HERVK_113P63132 956 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ASIC1P78348 528 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ADARB1P78563 741 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TFAMQ00059 246 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 GTF2BQ00403 316 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CAV1Q03135 178 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 LIPEQ05469 1076 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 PRKCDQ05655 676 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 FGL1Q08830 312 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 MERTKQ12866 999 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 STX5Q13190 355 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ILKQ13418 452 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 FLOT2Q14254 428 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 GRK1Q15835 563 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ATP6AP1Q15904 470 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SSX2Q16385 188 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 DGUOKQ16854 277 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 LRRC26Q2I0M4 334 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 BCL7AQ4VC05 210 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 FAM74A3Q4VXF1 159 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 HSD17B12Q53GQ0 312 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TMEM31Q5JXX7 168 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 OR5M10Q6IEU7 315 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SLC25A25Q6KCM7 469 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SCYL2Q6P3W7 929 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CNSTQ6PJW8 725 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TEX261Q6UWH6 196 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 FAM183BPQ6ZVS7 135 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CYS1Q717R9 158 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 STRADAQ7RTN6 431 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SSX9Q7RTT3 188 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 C16orf62Q7Z3J2 963 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF571Q7Z3V5 609 aaPredicted RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 RABEPKQ7Z6M1 372 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 RAB43Q86YS6 212 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 RDH10Q8IZV5 341 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 THEM5Q8N1Q8 247 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF619Q8N2I2 560 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CERS5Q8N5B7 392 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ARRDC1Q8N5I2 433 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 EIF4E3Q8N5X7 224 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 UBL4BQ8N7F7 174 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 YIPF7Q8N8F6 280 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TTC29Q8NA56 475 aaPredicted RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 Q8NFD4 153 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 OR1M1Q8NGA1 313 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 OR6X1Q8NH79 312 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 AKR7LQ8NHP1 331 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 NDNFQ8TB73 568 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CA5BP1Q8WTZ4 195 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 PPWD1Q96BP3 646 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 YIPF6Q96EC8 236 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 C19orf60Q96EN9 201 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 C14orf144Q96I85 54 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 RASL10BQ96S79 203 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 S1PR3Q99500 378 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SPAG8Q99932 426 aaPredicted RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF559Q9BR84 538 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 LXNQ9BS40 222 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 C2orf88Q9BSF0 95 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 PRRG3Q9BZD7 231 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ACPTQ9BZG2 426 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ZYG11BQ9C0D3 744 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 BOLA2Q9H3K6 86 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 PIGUQ9H490 435 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 XKR8Q9H6D3 395 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 MRPL47Q9HD33 250 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 MRPS30Q9NP92 439 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 NIT2Q9NQR4 276 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 C19orf12Q9NSK7 152 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 NUDT15Q9NV35 164 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TREM2Q9NZC2 230 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 MYEF2Q9P2K5 600 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 OPTCQ9UBM4 332 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CD300AQ9UGN4 299 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 DCDC2Q9UHG0 476 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 PURGQ9UJV8 347 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 EMCNQ9ULC0 261 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SNX6Q9UNH7 406 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TRAPPC4Q9Y296 219 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SAMHD1Q9Y3Z3 626 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 U3KQ87 197 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 DOT1LQ8TEK3 1739 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ARAP2Q8WZ64 1704 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 KIAA1551Q9HCM1 1747 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 IGSF9BQ9UPX0 1349 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 RIC1Q4ADV7 1423 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 TJP1Q07157 1748 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 UBR1Q8IWV7 1749 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 ARFGEF1Q9Y6D6 1849 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 A0A0U1RQV5 110 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 RGSL1A5PLK6 1076 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 TMEM210A6NLX4 147 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 KRBOX1C9JBD0 128 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 E5RI56 91 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 F8VP50 259 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 FOXE1O00358 373 aaPredicted RBP2.43□□□□□ -2.02
LINC01040-201ENST00000425048 TCAPO15273 167 aa2.43□□□□□ -2.02
LINC01040-201ENST00000425048 CST8O60676 142 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms