RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ZNF85Q03923 595 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 EIF2B1Q14232 305 aaKnown RBP11.77□□□□□ -0.52
PRPF39-202ENST00000424478 XAF1Q6GPH4 301 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 OR10H5Q8NGA6 315 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 OR5M11Q96RB7 305 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 DUSP21Q9H596 190 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 B3GAT2Q9NPZ5 323 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 CENPMQ9NSP4 180 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 TPRKBQ9Y3C4 175 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 GRIP1Q9Y3R0 1128 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 HRNRQ86YZ3 2850 aaPredicted RBP11.77□□□□□ -0.52
PRPF39-202ENST00000424478 LCKP06239 509 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 CCDC159P0C7I6 412 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 RBM48Q5RL73 367 aaKnown RBP11.77□□□□□ -0.53
PRPF39-202ENST00000424478 RIPPLY2Q5TAB7 128 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 Q6ZT83 130 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 MYPOPQ86VE0 399 aaPredicted RBP11.77□□□□□ -0.53
PRPF39-202ENST00000424478 ZC3HAV1LQ96H79 300 aaKnown RBP11.77□□□□□ -0.53
PRPF39-202ENST00000424478 BRD7Q9NPI1 651 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 FBXL3Q9UKT7 428 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 SLC5A6Q9Y289 635 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 RGS10O43665 173 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 TNFAIP8O95379 198 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 CDK1P06493 297 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 LIMS3P0CW19 117 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 LIMS4P0CW20 117 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 SMIM18P0DKX4 95 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 OR8G3PP0DMU2 310 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 PSMB10P40306 273 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 GALNT11Q8NCW6 608 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 GATAD2BQ8WXI9 593 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 SNX18Q96RF0 628 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 SFXN3Q9BWM7 321 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 GP6Q9HCN6 339 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 MOKQ9UQ07 419 aa11.77□□□□□ -0.53
PRPF39-202ENST00000424478 FASNP49327 2511 aaKnown RBP11.76□□□□□ -0.53
PRPF39-202ENST00000424478 HEATR1Q9H583 2144 aaKnown RBP11.76□□□□□ -0.53
PRPF39-202ENST00000424478 DOPEY1Q5JWR5 2465 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 DAPL1A0PJW8 107 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 A8MXE2 369 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 RPP14O95059 124 aaKnown RBP11.76□□□□□ -0.53
PRPF39-202ENST00000424478 HOXD4P09016 255 aaPredicted RBP11.76□□□□□ -0.53
PRPF39-202ENST00000424478 DBHP09172 617 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF32P17041 273 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 MSR1P21757 451 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 ENTPD1P49961 510 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 GTF2A1P52655 376 aaPredicted RBP11.76□□□□□ -0.53
PRPF39-202ENST00000424478 OR12D2P58182 307 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 SLC35D3Q5M8T2 416 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 STAC2Q6ZMT1 411 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 SLC16A14Q7RTX9 510 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF433Q8N7K0 673 aaPredicted RBP11.76□□□□□ -0.53
PRPF39-202ENST00000424478 OR10S1Q8NGN2 331 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 TMEM80Q96HE8 168 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 ABHD6Q9BV23 337 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 LINC00470Q9BZP3 86 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 PLCXD1Q9NUJ7 323 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 FKBP14Q9NWM8 211 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 GALNT8Q9NY28 637 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 LAMP5Q9UJQ1 280 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 ABCA4P78363 2273 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 HSPB2A8KAH6 182 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 J3QRE1 110 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 RAB36O95755 333 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 CELA3BP08861 270 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 MPGP29372 298 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 GUCA1AP43080 201 aaPredicted RBP11.76□□□□□ -0.53
PRPF39-202ENST00000424478 PRSS12P56730 875 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 HSPB2Q16082 182 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 LCN1P1Q5VSP4 162 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 OR7E24Q6IFN5 339 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF774Q6NX45 483 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 OR1K1Q8NGR3 316 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 HSD17B8Q92506 261 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 PPP1R14AQ96A00 147 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF649Q9BS31 505 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 SLCO1C1Q9NYB5 712 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 GDF2Q9UK05 429 aaPredicted RBP11.76□□□□□ -0.53
PRPF39-202ENST00000424478 IKZF2Q9UKS7 526 aa11.76□□□□□ -0.53
PRPF39-202ENST00000424478 E9PI62 339 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 J3QLW9 94 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 DVL2O14641 736 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 LALBAP00709 142 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 HSMCR30P0CW71 290 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 SLC2A1P11166 492 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF19P17023 458 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 CCKARP32238 428 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 OPRM1P35372 400 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 GALK2Q01415 458 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 RAB40BQ12829 278 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 ODF4Q2M2E3 257 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 SFRP5Q5T4F7 317 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 SLC16A9Q7RTY1 509 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 NAA40Q86UY6 237 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 CDC20BQ86Y33 519 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 SPARTQ8N0X7 666 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 S100PBPQ96BU1 408 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 ERVK13-1Q9NX77 482 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms