RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 DPPA2Q7Z7J5 298 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 MICU2Q8IYU8 434 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 OR2Z1Q8NG97 314 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 OR10A6Q8NH74 314 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 SGTBQ96EQ0 304 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 C7orf26Q96N11 449 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 CGREF1Q99674 301 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 CCDC28BQ9BUN5 200 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 PCDHAC1Q9H158 963 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 KCNN2Q9H2S1 579 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 KAT8Q9H7Z6 458 aaKnown RBP6.82□□□□□ -1.32
VIM-202ENST00000421459 PATZ1Q9HBE1 687 aaKnown RBP6.82□□□□□ -1.32
VIM-202ENST00000421459 TNFRSF19Q9NS68 423 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 RIMS3Q9UJD0 308 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 CORO2BQ9UQ03 480 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 SH3GLB1Q9Y371 365 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 INSIG2Q9Y5U4 225 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 TGP01266 2768 aa6.82□□□□□ -1.32
VIM-202ENST00000421459 ARHGAP32A7KAX9 2087 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 A0A1W2PPL8 197 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 TIMM8AO60220 97 aaPredicted RBP6.81□□□□□ -1.32
VIM-202ENST00000421459 ENTPD5O75356 428 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 FOXH1O75593 365 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 TGDSO95455 350 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 IGHMP01871 453 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 TSPAN19P0C672 248 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 THRBP10828 461 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 ZNF12P17014 697 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 PCGF2P35227 344 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 ATP4BP51164 291 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 TAS2R41P59536 307 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 HOXA4Q00056 320 aaPredicted RBP6.81□□□□□ -1.32
VIM-202ENST00000421459 CDK5R2Q13319 367 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 TAF11Q15544 211 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 NRN1LQ496H8 165 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 MIDNQ504T8 468 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 MTX3Q5HYI7 312 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 FAM27BQ5VT28 67 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 TREML1Q86YW5 311 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 OR5AS1Q8N127 324 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 ZNF420Q8TAQ5 688 aaPredicted RBP6.81□□□□□ -1.32
VIM-202ENST00000421459 SLC26A7Q8TE54 656 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 TMEM239Q8WW34 195 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 ITLN1Q8WWA0 313 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 SLC7A6Q92536 515 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 CMBLQ96DG6 245 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 MPP4Q96JB8 637 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 C4orf45Q96LM5 186 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 SIGLEC11Q96RL6 698 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 SLC19A3Q9BZV2 496 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 EGLN1Q9GZT9 426 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 EVA1AQ9H8M9 152 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 EMC7Q9NPA0 242 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 TMEM106BQ9NUM4 274 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 PLEK2Q9NYT0 353 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 STARD10Q9Y365 291 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 NDUFAF1Q9Y375 327 aa6.81□□□□□ -1.32
VIM-202ENST00000421459 VWFP04275 2813 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 TRAV27A0A087WT01 109 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 F5H0A9 414 aaPredicted RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 H0YL77 283 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 FBP2O00757 339 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 IMPA2O14732 288 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 CYB5R3P00387 301 aaPredicted RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 CD55P08174 381 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 ADH4P08319 380 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 CST2P09228 141 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 YAP1P46937 504 aaKnown RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 DAP3P51398 398 aaKnown RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 CTXN1P60606 82 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 BTG1P62324 171 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 SLC3A1Q07837 685 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 DBPQ10586 325 aaPredicted RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 NFYCQ13952 458 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 HLXQ14774 488 aaPredicted RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 VMACQ2NL98 169 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 ALG10Q5BKT4 473 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 RABL3Q5HYI8 236 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 FAM201AQ5SY85 155 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 C1orf94Q6P1W5 598 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 CROCCP2Q86T23 111 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 PATL1Q86TB9 770 aaKnown RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 LRRC28Q86X40 367 aaPredicted RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 DPP10Q8N608 796 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 ZNF283Q8N7M2 679 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 LRRC75AQ8NAA5 344 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 OR52E2Q8NGJ4 325 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 OR51A7Q8NH64 312 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 LRRC8CQ8TDW0 803 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 POP5Q969H6 163 aaKnown RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 MS4A7Q9GZW8 240 aaPredicted RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 TXNIPQ9H3M7 391 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 GMPR2Q9P2T1 348 aaKnown RBP6.8□□□□□ -1.32
VIM-202ENST00000421459 RHCGQ9UBD6 479 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 ZDHHC8Q9ULC8 765 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 TIMM10BQ9Y5J6 103 aa6.8□□□□□ -1.32
VIM-202ENST00000421459 PPIAL4EA0A075B759 164 aa6.79□□□□□ -1.32
VIM-202ENST00000421459 PPIAL4CA0A0B4J2A2 164 aa6.79□□□□□ -1.32
VIM-202ENST00000421459 CEACAM18A8MTB9 384 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms