RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 BTN2A1Q7KYR7 527 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 FCRLAQ7L513 359 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SYT9Q86SS6 491 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 HIST2H2ABQ8IUE6 130 aaPredicted RBP13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR11G2Q8NGC1 345 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR6M1Q8NGM8 313 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ASB5Q8WWX0 329 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PHF21AQ96BD5 680 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SCMH1Q96GD3 660 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CYB5R1Q9UHQ9 305 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 N6AMT1Q9Y5N5 214 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PATE3B3GLJ2 98 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LANCL1O43813 399 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ATP6V1G1O75348 118 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 C1QBP02746 253 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TCRBP04435 133 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 H2BFMP0C1H6 154 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 HLA-DOBP13765 273 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ZNF43P17038 809 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 P2RY4P51582 365 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 FOXL2P58012 376 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MLF1P58340 268 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 DGCR2P98153 550 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 EIF3IQ13347 325 aaKnown RBP12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ANGPT1Q15389 498 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 RAB11BQ15907 218 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CD276Q5ZPR3 534 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TMEM225Q6GV28 225 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TMPPEQ6ZT21 453 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 DCXRQ7Z4W1 244 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 RPS19BP1Q86WX3 136 aaKnown RBP12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CACNG6Q9BXT2 260 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 HPF1Q9NWY4 346 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ZNF107Q9UII5 783 aaPredicted RBP12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR52A1Q9UKL2 312 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MRPS7Q9Y2R9 242 aaKnown RBP12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TECTAO75443 2155 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LOC390937A0A1W2PQ73 354 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ZNF878C9JN71 531 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SULT1C2O00338 296 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SNAPC5O75971 98 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 WISP1O95388 367 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 IGFBP3P17936 291 aaPredicted RBP12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 STOMP27105 288 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MPLP40238 635 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 HIST3H3Q16695 136 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 BCL2L15Q5TBC7 163 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LRRC69Q6ZNQ3 347 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 NOXA1Q86UR1 476 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LSRQ86X29 649 aaPredicted RBP12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SIAH3Q8IW03 269 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 UBE2J2Q8N2K1 259 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TMEM156Q8N614 296 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PNPLA2Q96AD5 504 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 INTS12Q96CB8 462 aaKnown RBP12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR5B2Q96R09 309 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 NAA11Q9BSU3 229 aaPredicted RBP12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SLCO5A1Q9H2Y9 848 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 NUDT15Q9NV35 164 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 NUFIP1Q9UHK0 495 aaKnown RBP12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PADI1Q9ULC6 663 aa12.99□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TRAV8-7A0A075B6U6 113 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TMEM269A0A1B0GVZ9 245 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ANKRD20A5PA0PJZ0 165 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SULT2B1O00204 365 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CDK2AP1O14519 115 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CBR3O75828 277 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 GLSO94925 669 aaPredicted RBP12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 HPP00738 406 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ERCC1P07992 297 aaPredicted RBP12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CD3GP09693 182 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LIFP15018 202 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CSRP1P21291 193 aaKnown RBP12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 RPS27P42677 84 aaKnown RBP12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PTH2RP49190 550 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ZNF133P52736 654 aaPredicted RBP12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PSMA6P60900 246 aaKnown RBP12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 H3F3AP84243 136 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 FAM189A2Q15884 450 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 FAM166AQ6J272 317 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CDH26Q8IXH8 852 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CCDC54Q8NEL0 328 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR1J4Q8NGS1 313 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LIN37Q96GY3 246 aaPredicted RBP12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PIGQQ9BRB3 760 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MESP1Q9BRJ9 268 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 FBXL2Q9UKC9 423 aa12.98□□□□□ -0.33
HLA-DPA1-242ENST00000419277 A0A0B4J203 849 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 C2orf72A6NCS6 295 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ZNF726A6NNF4 738 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 EFNA2O43921 213 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PEX14O75381 377 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MAS1P04201 325 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CSF1P09603 554 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CCL4P13236 92 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 IL11P20809 199 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CDK2P24941 298 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 GUCA1AP43080 201 aaPredicted RBP12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 DNASE1L1P49184 302 aa12.97□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TAS2R20P59543 309 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms