RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ALDH16A1Q8IZ83 802 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 ABHD4Q8TB40 342 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 SIGLEC11Q96RL6 698 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 PARD6BQ9BYG5 372 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 OR2H1Q9GZK4 316 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 MS4A7Q9GZW8 240 aaPredicted RBP12.95□□□□□ -0.34
DDX56-202ENST00000415758 WNT5BQ9H1J7 359 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 ELOVL3Q9HB03 270 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 TUBG2Q9NRH3 451 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.95□□□□□ -0.34
DDX56-202ENST00000415758 IL20RAQ9UHF4 553 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 TIMM10BQ9Y5J6 103 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 NOTCH1P46531 2555 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 CMYA5Q8N3K9 4069 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 GMNCA6NCL1 334 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 POLR3GO15318 223 aaPredicted RBP12.94□□□□□ -0.34
DDX56-202ENST00000415758 PLATP00750 562 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 CST2P09228 141 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 NR2C1P13056 603 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 TNFRSF1AP19438 455 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 CD247P20963 164 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 CD80P33681 288 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 AQP2P41181 271 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 ARHGDIAP52565 204 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 BTG1P62324 171 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 ERVK-25P63136 954 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 ZMYND11Q15326 602 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 SGCAQ16586 387 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 PATL1Q86TB9 770 aaKnown RBP12.94□□□□□ -0.34
DDX56-202ENST00000415758 SLC30A8Q8IWU4 369 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 OR52E2Q8NGJ4 325 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 HDAC2Q92769 488 aaKnown RBP12.94□□□□□ -0.34
DDX56-202ENST00000415758 TMIGD2Q96BF3 282 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 ZBTB9Q96C00 473 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 C4orf45Q96LM5 186 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 CCDC28BQ9BUN5 200 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 PRDM13Q9H4Q3 707 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 NANOGQ9H9S0 305 aa12.94□□□□□ -0.34
DDX56-202ENST00000415758 DOCK11Q5JSL3 2073 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 A0A1B0GUS0 222 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 OR7A10O76100 309 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 WNT2P09544 360 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 MDKP21741 143 aaPredicted RBP12.93□□□□□ -0.34
DDX56-202ENST00000415758 TNFSF4P23510 183 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 RBM34P42696 430 aaKnown RBP12.93□□□□□ -0.34
DDX56-202ENST00000415758 IDH3AP50213 366 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 FMODQ06828 376 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 HNRNPA0Q13151 305 aaKnown RBP12.93□□□□□ -0.34
DDX56-202ENST00000415758 ESCO2Q56NI9 601 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 ARL9Q6T311 187 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 FOXL2NBQ6ZUU3 175 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 SYT9Q86SS6 491 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 VANGL1Q8TAA9 524 aaPredicted RBP12.93□□□□□ -0.34
DDX56-202ENST00000415758 FNDC8Q8TC99 324 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 UPRTQ96BW1 309 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 TAMM41Q96BW9 452 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 C7orf26Q96N11 449 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 TXNIPQ9H3M7 391 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 MAN2C1Q9NTJ4 1040 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 TBCCD1Q9NVR7 557 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 NKIRAS1Q9NYS0 192 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 OR5V1Q9UGF6 321 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 IL19Q9UHD0 177 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 RAB21Q9UL25 225 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 LRCH1Q9Y2L9 728 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 PRKDCP78527 4128 aaKnown RBP12.93□□□□□ -0.34
DDX56-202ENST00000415758 WNK1Q9H4A3 2382 aa12.93□□□□□ -0.34
DDX56-202ENST00000415758 TIMM8AO60220 97 aaPredicted RBP12.92□□□□□ -0.34
DDX56-202ENST00000415758 IGHV4-38-2P0DP08 117 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 KITLGP21583 273 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 LAP3P28838 519 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 MDH2P40926 338 aaKnown RBP12.92□□□□□ -0.34
DDX56-202ENST00000415758 PCBD1P61457 104 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 TAF11Q15544 211 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 CYP51A1Q16850 503 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 AGKQ53H12 422 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 ZNF362Q5T0B9 420 aaPredicted RBP12.92□□□□□ -0.34
DDX56-202ENST00000415758 ZNF774Q6NX45 483 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 LRRN1Q6UXK5 716 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 Q6ZR03 302 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 NKAIN4Q8IVV8 208 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 MUC20Q8N307 709 aaPredicted RBP12.92□□□□□ -0.34
DDX56-202ENST00000415758 PARP8Q8N3A8 854 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 MOSPD2Q8NHP6 518 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 PFN4Q8NHR9 129 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 RASSF5Q8WWW0 418 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 NSMAFQ92636 917 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 TAF15Q92804 592 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX56-202ENST00000415758 DACT3Q96B18 629 aaPredicted RBP12.92□□□□□ -0.34
DDX56-202ENST00000415758 SGTBQ96EQ0 304 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 EBF4Q9BQW3 602 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 WACQ9BTA9 647 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 ALG12Q9BV10 488 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 C20orf141Q9NUB4 165 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 PPP1R3CQ9UQK1 317 aa12.92□□□□□ -0.34
DDX56-202ENST00000415758 TMEM178BH3BS89 294 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 COX5BP10606 129 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 GSTM3P21266 225 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 RBMXP38159 391 aaKnown RBP12.91□□□□□ -0.34
DDX56-202ENST00000415758 CRYBA2P53672 197 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms