RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 C1orf21Q9H246 121 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 SYT4Q9H2B2 425 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 OR52D1Q9H346 318 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 TPK1Q9H3S4 243 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 POLE4Q9NR33 117 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 FN1P02751 2386 aaKnown RBP9.63□□□□□ -0.87
RFFL-204ENST00000414419 INAFM1C9JVW0 142 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 TLX2O43763 284 aaPredicted RBP9.63□□□□□ -0.87
RFFL-204ENST00000414419 CD5LO43866 347 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 PPP1R3DO95685 299 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 RENP00797 406 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 MT-ND5P03915 603 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 T-ENOLP0DO92 83 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 APEHP13798 732 aaKnown RBP9.63□□□□□ -0.87
RFFL-204ENST00000414419 CTLA4P16410 223 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 CRABP1P29762 137 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 GCH1P30793 250 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 ALDH3B1P43353 468 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 SCRN3Q0VDG4 424 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 MSMPQ1L6U9 139 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 C1orf94Q6P1W5 598 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 TRPM8Q7Z2W7 1104 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 GLB1L2Q8IW92 636 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 C1orf174Q8IYL3 243 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 OR52L1Q8NGH7 329 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 UBASH3BQ8TF42 649 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 CCDC124Q96CT7 223 aaKnown RBP9.63□□□□□ -0.87
RFFL-204ENST00000414419 ASB9Q96DX5 294 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 POM121L2Q96KW2 1035 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 FOXN4Q96NZ1 517 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 GPA33Q99795 319 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 THTPAQ9BU02 230 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 TRIM15Q9C019 465 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 MAGIXQ9H6Y5 334 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 ELOVL3Q9HB03 270 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 EMC7Q9NPA0 242 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 YAE1D1Q9NRH1 226 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 SLCO1C1Q9NYB5 712 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 TAS2R1Q9NYW7 299 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 TAAR3PQ9P1P4 343 aa9.63□□□□□ -0.87
RFFL-204ENST00000414419 NDRG4Q9ULP0 352 aaKnown RBP9.63□□□□□ -0.87
RFFL-204ENST00000414419 COA3Q9Y2R0 106 aaPredicted RBP9.63□□□□□ -0.87
RFFL-204ENST00000414419 SONP18583 2426 aaKnown RBP9.63□□□□□ -0.87
RFFL-204ENST00000414419 IMPA2O14732 288 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 GYG2O15488 501 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 DOK2O60496 412 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 CCNB2O95067 398 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 TXNDC12O95881 172 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 ZNF250P15622 560 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 NR4A2P43354 598 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 GSSP48637 474 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 ARHGDIAP52565 204 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 HMGA2P52926 109 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 FXYD6P3P58550 94 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 TSPAN31Q12999 210 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 ENDOGQ14249 297 aaKnown RBP9.62□□□□□ -0.87
RFFL-204ENST00000414419 MAD2L1BPQ15013 274 aaPredicted RBP9.62□□□□□ -0.87
RFFL-204ENST00000414419 TMEM249Q2WGJ8 235 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 ALKBH6Q3KRA9 238 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 ZNF718Q3SXZ3 478 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 CYB5R2Q6BCY4 276 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 RPL13AP3Q6NVV1 102 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 ZNF774Q6NX45 483 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 LEG1Q6P5S2 330 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 TMEM154Q6P9G4 183 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 UGT2A3Q6UWM9 527 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 ZNF786Q8N393 782 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 ABHD4Q8TB40 342 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 SAMD8Q96LT4 415 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 NUAK2Q9H093 628 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 WNT5BQ9H1J7 359 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 REEP1Q9H902 201 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 FAM53CQ9NYF3 392 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 VSX1Q9NZR4 365 aaPredicted RBP9.62□□□□□ -0.87
RFFL-204ENST00000414419 MYEF2Q9P2K5 600 aaKnown RBP9.62□□□□□ -0.87
RFFL-204ENST00000414419 POLR1DQ9Y2S0 133 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 LYVE1Q9Y5Y7 322 aa9.62□□□□□ -0.87
RFFL-204ENST00000414419 MALRD1Q5VYJ5 2156 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 LOC100509620A0A075B734 347 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 TCRBV5S2A0A599 114 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 A8MV72 311 aaPredicted RBP9.61□□□□□ -0.87
RFFL-204ENST00000414419 ARPC3O15145 178 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 SGCEO43556 437 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 IDH3BO43837 385 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 CLPTM1O96005 669 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 SCG5P05408 212 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 NAT2P11245 290 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 CDKN2AP42771 156 aaKnown RBP9.61□□□□□ -0.87
RFFL-204ENST00000414419 MAGEA2P43356 314 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 HTR5AP47898 357 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 ERVS71-1P61550 626 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 LSM6P62312 80 aaKnown RBP9.61□□□□□ -0.87
RFFL-204ENST00000414419 MS4A2Q01362 244 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 KRTAP1-1Q07627 177 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 TRAP1Q12931 704 aaKnown RBP9.61□□□□□ -0.87
RFFL-204ENST00000414419 AQP6Q13520 282 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 DNAL1Q4LDG9 190 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 OR2T5Q6IEZ7 315 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 PGBD2Q6P3X8 592 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 PGM2L1Q6PCE3 622 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms