RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 PABPC1L2AQ5JQF8 200 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 MAMDC4Q6UXC1 1216 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 UBE3DQ7Z6J8 389 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 EXD3Q8N9H8 876 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 BVESQ8NE79 360 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 ZNF583Q96ND8 569 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 GPR34Q9UPC5 381 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 ZNF142P52746 1687 aaPredicted RBP11.88□□□□□ -0.51
COL6A3-206ENST00000409809 IFITM5A6NNB3 132 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 SPINT2O43291 252 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 PGA3P0DJD8 388 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 G6PCP35575 357 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 PCP4P48539 62 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 PLXDC2Q6UX71 529 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 Q6ZVU0 165 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 ANGPTL4Q9BY76 406 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 RAB6CQ9H0N0 254 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 HRASLS2Q9NWW9 162 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 OR5K3A6NET4 321 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 KIAA1958Q8N8K9 716 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 GINS3Q9BRX5 216 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 ROBO1Q9Y6N7 1651 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 DUX1O43812 170 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 SELENOFO60613 162 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 F2P00734 622 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 MBPP02686 304 aaPredicted RBP11.88□□□□□ -0.51
COL6A3-206ENST00000409809 F3P13726 295 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 GCH1P30793 250 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 PIGAP37287 484 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 SMUG1Q53HV7 270 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 OR4C16Q8NGL9 310 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 SLC38A5Q8WUX1 472 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 NUDT16L1Q9BRJ7 211 aaKnown RBP11.88□□□□□ -0.51
COL6A3-206ENST00000409809 SELENOIQ9C0D9 397 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 ALKBH4Q9NXW9 302 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 DNMT3BQ9UBC3 853 aaKnown RBP11.88□□□□□ -0.51
COL6A3-206ENST00000409809 LEUTXA8MZ59 168 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 YIF1AO95070 293 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 ARRB2P32121 409 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 CARD17Q5XLA6 110 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 ABI3BPQ7Z7G0 1075 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 LRFN3Q9BTN0 628 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 C1QTNF3Q9BXJ4 246 aa11.88□□□□□ -0.51
COL6A3-206ENST00000409809 SERPINE3A8MV23 424 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 GALR3O60755 368 aaPredicted RBP11.87□□□□□ -0.51
COL6A3-206ENST00000409809 C15orf39Q6ZRI6 1047 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 SLC35E1Q96K37 410 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 F2RL3Q96RI0 385 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 SCO2O43819 266 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 C8AP07357 584 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
COL6A3-206ENST00000409809 OR8D4Q8NGM9 314 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 OR2A1Q8NGT9 310 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 ZC3HAV1LQ96H79 300 aaKnown RBP11.87□□□□□ -0.51
COL6A3-206ENST00000409809 GPR78Q96P69 363 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 COL25A1Q9BXS0 654 aaPredicted RBP11.87□□□□□ -0.51
COL6A3-206ENST00000409809 TMEM9BQ9NQ34 198 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 SCN1AP35498 2009 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 CXorf65A6NEN9 183 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 PSMB10P40306 273 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 SH3RF2Q8TEC5 729 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 SULT2B1O00204 365 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 PIRO00625 290 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 NPY4RP50391 375 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 CDC20BQ86Y33 519 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 PTP4A1Q93096 173 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 NPAS1Q99742 590 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 CYSLTR2Q9NS75 346 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 P04436 131 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 CNN1P51911 297 aaKnown RBP11.87□□□□□ -0.51
COL6A3-206ENST00000409809 ZNF528Q3MIS6 628 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 LBX2Q6XYB7 198 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 ATOH8Q96SQ7 321 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 RBM24Q9BX46 236 aaKnown RBP11.87□□□□□ -0.51
COL6A3-206ENST00000409809 CACNA1IQ9P0X4 2223 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 ZIC2O95409 532 aaPredicted RBP11.87□□□□□ -0.51
COL6A3-206ENST00000409809 MIDNQ504T8 468 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 SLC26A10Q8NG04 563 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 OR5M11Q96RB7 305 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 ZIC5Q96T25 663 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 MCTS1Q9ULC4 181 aaKnown RBP11.87□□□□□ -0.51
COL6A3-206ENST00000409809 WSB1Q9Y6I7 421 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 LOC102723971A0A1B0GUV8 181 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 A0A1W2PPH5 198 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 TBX19O60806 448 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 MPGP29372 298 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
COL6A3-206ENST00000409809 PLSCR5A0PG75 271 aa11.86□□□□□ -0.51
COL6A3-206ENST00000409809 CD14P08571 375 aa11.86□□□□□ -0.51
COL6A3-206ENST00000409809 LIPCP11150 499 aa11.86□□□□□ -0.51
COL6A3-206ENST00000409809 TPBGQ13641 420 aa11.86□□□□□ -0.51
COL6A3-206ENST00000409809 OVCH2Q7RTZ1 564 aa11.86□□□□□ -0.51
COL6A3-206ENST00000409809 HEYLQ9NQ87 328 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-206ENST00000409809 TOX3O15405 576 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-206ENST00000409809 KCNAB3O43448 404 aa11.86□□□□□ -0.51
COL6A3-206ENST00000409809 GLAP06280 429 aa11.86□□□□□ -0.51
COL6A3-206ENST00000409809 ZNF140P52738 457 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-206ENST00000409809 RPEL1Q2QD12 228 aa11.86□□□□□ -0.51
COL6A3-206ENST00000409809 WDR92Q96MX6 357 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms