RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 NEIL2Q969S2 332 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 ZBTB8AQ96BR9 441 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 TM4SF18Q96CE8 201 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 FOXRED1Q96CU9 486 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 LMLNQ96KR4 655 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 MRGPRX1Q96LB2 322 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 AQP10Q96PS8 301 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 OR14A2Q96R54 314 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 CD180Q99467 661 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 NDUFAF3Q9BU61 184 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 OR52A5Q9H2C5 316 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 THAP10Q9P2Z0 257 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 PISDQ9UG56 409 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 SLC13A4Q9UKG4 626 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 CCDC187A0A096LP49 1063 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 A0A0B4J2A0 478 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 TRBV2A0A0J9YWF9 115 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 A6NLC8 198 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 MARCH11A6NNE9 402 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 PATE3B3GLJ2 98 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 SRPX2O60687 465 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 CRTAPO75718 401 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 AIFM1O95831 613 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 PLGP00747 810 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 HCKP08631 526 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 ADRB3P13945 408 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 GTF2F2P13984 249 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 ITPKBP27987 946 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 PRSS3P35030 304 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 MPLP40238 635 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 ATP1B3P54709 279 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 RPS26P62854 115 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 ENPP2Q13822 863 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 PIP5KL1Q5T9C9 394 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 LRRTM1Q86UE6 522 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 NRMQ8IXM6 262 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 SLC35F3Q8IY50 421 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 TMEFF1Q8IYR6 380 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 GABRG1Q8N1C3 465 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 OR2L13Q8N349 312 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 OR13C5Q8NGS8 318 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 M1APQ8TC57 530 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 GCDHQ92947 438 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 MISP3Q96FF7 219 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 GALNT14Q96FL9 552 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 SLC41A3Q96GZ6 507 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 LRIG1Q96JA1 1093 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 CHST6Q9GZX3 395 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 ATG5Q9H1Y0 275 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 RHBGQ9H310 441 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 MEPEQ9NQ76 525 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 SHPKQ9UHJ6 478 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF230Q9UIE0 474 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 CYP8B1Q9UNU6 501 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 ADAM18Q9Y3Q7 739 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 DYRK1BQ9Y463 629 aa9.62□□□□□ -0.87
NIF3L1-204ENST00000409357 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 FAM183AA6NL82 134 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 RIIAD1A6NNX1 92 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF724A8MTY0 619 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 H7C1Q1 480 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 WNT11O96014 354 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TBC1D3HP0C7X1 549 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 LINC00614P0C842 121 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 NPPBP16860 134 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TEAD1P28347 426 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 MPIP34949 423 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 BUD31P41223 144 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 UBE2MP61081 183 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 LTBQ06643 244 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 LMAN2Q12907 356 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 KIAA0141Q14154 515 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 SLBPQ14493 270 aaKnown RBP eCLIP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 MEF2DQ14814 521 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF750Q32MQ0 723 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 AWAT1Q58HT5 328 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 RNF219Q5W0B1 726 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TBC1D3GQ6DHY5 549 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 NXPE4Q6UWF7 544 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 STAC2Q6ZMT1 411 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 GDF7Q7Z4P5 450 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 DPPA2Q7Z7J5 298 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 SYT9Q86SS6 491 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 PEG10Q86TG7 708 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 NUDT13Q86X67 352 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TRAPPC5Q8IUR0 188 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 BOLLQ8N9W6 283 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 OR10R2Q8NGX6 335 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 RNASEH2CQ8TDP1 164 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 SKA2Q8WVK7 121 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 S100PBPQ96BU1 408 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TBX5Q99593 518 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 WNT5BQ9H1J7 359 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TMEM74BQ9NUR3 256 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 SIDT1Q9NXL6 827 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 DLL3Q9NYJ7 618 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 STEAP1Q9UHE8 339 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 SERTAD3Q9UJW9 196 aa9.61□□□□□ -0.87
NIF3L1-204ENST00000409357 TCFL5Q9UL49 500 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms