RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 GSKIPQ9P0R6 139 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 GHRLQ9UBU3 117 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 KCNN3Q9UGI6 736 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 TRIOBPQ9H2D6 2365 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 MN1Q10571 1320 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 MGAMO43451 1857 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 IFITM5A6NNB3 132 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 B4E171 279 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 TRAPPC2LH3BP13 241 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 TNFSF15O95150 251 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 MT-ND4P03905 459 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 TCRBP04435 133 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 IRF2P14316 349 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 TSPAN7P41732 249 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF133P52736 654 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 ZXDAP98168 799 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF169Q14929 603 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 SLC10A1Q14973 349 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 GLYATL3Q5SZD4 288 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 PWWP2BQ6NUJ5 590 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 LYPD4Q6UWN0 246 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 SLC16A12Q6ZSM3 486 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 COX15Q7KZN9 410 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 DPPA2Q7Z7J5 298 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 YRDCQ86U90 279 aaKnown RBP4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 SIAH3Q8IW03 269 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 KDM8Q8N371 416 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 TEX19Q8NA77 164 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 OR1M1Q8NGA1 313 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 OR51D1Q8NGF3 324 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 OR6F1Q8NGZ6 308 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 GPR119Q8TDV5 335 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 NPRL2Q8WTW4 380 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 FBLIM1Q8WUP2 373 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 TAAR8Q969N4 342 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 SIGLEC11Q96RL6 698 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 FAM173AQ9BQD7 235 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 EMC6Q9BV81 110 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF471Q9BX82 626 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 SLC6A15Q9H2J7 730 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 OCEL1Q9H607 264 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 RNF167Q9H6Y7 350 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF286AQ9HBT8 521 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 FOXJ3Q9UPW0 622 aa4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 UBE2J1Q9Y385 318 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-207ENST00000406881 A0A0G2JMP0 313 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 A0A1W2PNR3 127 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 F5H0A9 414 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 STMND1H3BQB6 276 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 BHLHE40O14503 412 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 TO15178 435 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 TPPPO94811 219 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 SCGB1D2O95969 90 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 IGHA1P01876 353 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 SFTPBP07988 381 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 LINC00271P0C7V0 271 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 AKR1C4P17516 323 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 ELK1P19419 428 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 HLA-DMAP28067 261 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 LTBRP36941 435 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 CRYBB2P43320 205 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 CX3CR1P49238 355 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF136P52737 540 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 CLDN12P56749 244 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 RRAS2P62070 204 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 DUSP2Q05923 314 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 SQSTM1Q13501 440 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 ZMYND11Q15326 602 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 NKPD1Q17RQ9 610 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 CDONQ4KMG0 1287 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 CLVS2Q5SYC1 327 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 LAIR1Q6GTX8 287 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 CMTM1Q8IZ96 169 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 LRRC18Q8N456 261 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 DNAJC5GQ8N7S2 189 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 NOXO1Q8NFA2 376 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 OR4M2Q8NGB6 313 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 PTPMT1Q8WUK0 201 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 PIGCQ92535 297 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 CPNE4Q96A23 557 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 MIB2Q96AX9 1013 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 ABHD6Q9BV23 337 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 JAM3Q9BX67 310 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 GPR87Q9BY21 358 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 ARL6Q9H0F7 186 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 DNTTIP1Q9H147 329 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 ZCCHC4Q9H5U6 513 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 SLC17A5Q9NRA2 495 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 FLRT3Q9NZU0 649 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 CHST2Q9Y4C5 530 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 DSPPQ9NZW4 1301 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 PMS2P1A4D2B8 440 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 FITM1A5D6W6 292 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 A6NIN4 97 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 CDC42EP2O14613 210 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 DOK2O60496 412 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 GCM2O75603 506 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 ABHD16AO95870 558 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 HPP00738 406 aa4.28□□□□□ -1.72
PCDH11X-207ENST00000406881 IGF2P01344 180 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms