RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 SPARCP09486 303 aa13.69□□□□□ -0.22
LIMK2-204ENST00000406516 FTH1P19P0C7X4 201 aa13.69□□□□□ -0.22
LIMK2-204ENST00000406516 FAUP35544 74 aaKnown RBP13.69□□□□□ -0.22
LIMK2-204ENST00000406516 ZNF574Q6ZN55 896 aaPredicted RBP13.69□□□□□ -0.22
LIMK2-204ENST00000406516 BIVMQ86UB2 503 aa13.69□□□□□ -0.22
LIMK2-204ENST00000406516 ADIPOR1Q96A54 375 aa13.69□□□□□ -0.22
LIMK2-204ENST00000406516 SFXN2Q96NB2 322 aa13.69□□□□□ -0.22
LIMK2-204ENST00000406516 MNTQ99583 582 aa13.69□□□□□ -0.22
LIMK2-204ENST00000406516 DHRS9Q9BPW9 319 aa13.69□□□□□ -0.22
LIMK2-204ENST00000406516 UTP23Q9BRU9 249 aaKnown RBP13.69□□□□□ -0.22
LIMK2-204ENST00000406516 DHCR7Q9UBM7 475 aaKnown RBP13.69□□□□□ -0.22
LIMK2-204ENST00000406516 UNC13CQ8NB66 2214 aa13.69□□□□□ -0.22
LIMK2-204ENST00000406516 A0A1W2PPL8 197 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 SLC25A12O75746 678 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 RGS11O94810 467 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 IL5P05113 134 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 SLC6A8P48029 635 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 NR0B1P51843 470 aaKnown RBP13.68□□□□□ -0.22
LIMK2-204ENST00000406516 RAP2BP61225 183 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 RBMS2Q15434 407 aaKnown RBP13.68□□□□□ -0.22
LIMK2-204ENST00000406516 AANATQ16613 207 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 HYAL4Q2M3T9 481 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 ANKRD16Q6P6B7 361 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.68□□□□□ -0.22
LIMK2-204ENST00000406516 OR5M1Q8NGP8 315 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 MARVELD3Q96A59 401 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 NUDT9Q9BW91 350 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 GSX2Q9BZM3 304 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 CUTCQ9NTM9 273 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 MRTO4Q9UKD2 239 aaKnown RBP13.68□□□□□ -0.22
LIMK2-204ENST00000406516 TRAV36DV7A0A075B6V5 113 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 OR2M5A3KFT3 312 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 SNRPGP15A8MWD9 76 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 NTN3O00634 580 aaPredicted RBP13.68□□□□□ -0.22
LIMK2-204ENST00000406516 SLC16A7O60669 478 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 DDAH2O95865 285 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 GTF2F2P13984 249 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 ETFDHQ16134 617 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 ACKR1Q16570 336 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 DNM1P46Q6ZS02 220 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 PLPP7Q8NBV4 271 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 OR8S1Q8NH09 359 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 ZNF721Q8TF20 911 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 OMA1Q96E52 524 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 OR8B4Q96RC9 309 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 GAL3ST1Q99999 423 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 DLL3Q9NYJ7 618 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 ZNF224Q9NZL3 707 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 B9D1Q9UPM9 204 aa13.68□□□□□ -0.22
LIMK2-204ENST00000406516 TLCD2A6NGC4 264 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 PHYHO14832 338 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 DUX1O43812 170 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 OR6A2O95222 327 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 PNPP00491 289 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 IGKV3-11P04433 115 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 NFYAP23511 347 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-204ENST00000406516 INSM1Q01101 510 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-204ENST00000406516 SLC17A1Q14916 467 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 C2orf68Q2NKX9 166 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 C2orf76Q3KRA6 126 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 BPHLQ86WA6 291 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-204ENST00000406516 SLC38A6Q8IZM9 456 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 DVL3Q92997 716 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-204ENST00000406516 TBL1XR1Q9BZK7 514 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 PCDHGA1Q9Y5H4 931 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 UBE2QL1A1L167 161 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 PRSS37A4D1T9 235 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 CSF1P09603 554 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 RRASP10301 218 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 MECP2P51608 486 aaKnown RBP13.67□□□□□ -0.22
LIMK2-204ENST00000406516 EFNA3P52797 238 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 RAB11BQ15907 218 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 OR7E24Q6IFN5 339 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 MAMDC2Q7Z304 686 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-204ENST00000406516 MDGA2Q7Z553 956 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 C9orf40Q8IXQ3 194 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 OR51S1Q8NGJ8 323 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 FAM3DQ96BQ1 224 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 COQ3Q9NZJ6 369 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 NUP210LQ5VU65 1888 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 ARPC5O15511 151 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 DKK1O94907 266 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 OR2A4O95047 310 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 WNT11O96014 354 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 DHODHQ02127 395 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 MFGE8Q08431 387 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-204ENST00000406516 PLCXD2Q0VAA5 305 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 SQSTM1Q13501 440 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 EBPQ15125 230 aaKnown RBP13.67□□□□□ -0.22
LIMK2-204ENST00000406516 HLA-DQA1Q5Y7H0 255 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 ASPHD2Q6ICH7 369 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 FAM198BQ6UWH4 519 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 C3P1Q6ZMU1 363 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 OR2A7Q96R45 310 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 PTDSS2Q9BVG9 487 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 C12orf10Q9HB07 376 aa13.67□□□□□ -0.22
LIMK2-204ENST00000406516 MRPL22Q9NWU5 206 aaKnown RBP13.67□□□□□ -0.22
LIMK2-204ENST00000406516 FITM1A5D6W6 292 aa13.66□□□□□ -0.22
LIMK2-204ENST00000406516 DOK2O60496 412 aa13.66□□□□□ -0.22
LIMK2-204ENST00000406516 CDC40O60508 579 aaKnown RBP eCLIP13.66□□□□□ -0.224e-7■■■■□ 26.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms