RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 DOC2AQ14183 400 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 ITIH4Q14624 930 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 HES5Q5TA89 166 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 TTC19Q6DKK2 380 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 TWF2Q6IBS0 349 aaKnown RBP2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 PLET1Q6UQ28 207 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 TIFABQ6ZNK6 161 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 TMEM135Q86UB9 458 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 KATNAL2Q8IYT4 538 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 GABRG1Q8N1C3 465 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 COMMD1Q8N668 190 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 ZNF321PQ8N8H1 164 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 DUSP18Q8NEJ0 188 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 OR4C5Q8NGB2 326 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 CD300LFQ8TDQ1 290 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 ZFP90Q8TF47 636 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 FAM104AQ969W3 186 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 LINC00167Q96N53 147 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 AUNIPQ9H7T9 357 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 TMEM9BQ9NQ34 198 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 TUBG2Q9NRH3 451 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 RBAKQ9NYW8 714 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 CD84Q9UIB8 345 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 TBC1D24Q9ULP9 559 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 SLC17A4Q9Y2C5 497 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 UBN2Q6ZU65 1347 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 MROH5Q6ZUA9 1318 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 WDR62O43379 1518 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 PRRC2AP48634 2157 aaKnown RBP2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 A0A096LNJ9 63 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 TRBV9A0A0B4J1U6 114 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 TRAV39A0A0B4J263 110 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 A0A1B0GTQ1 180 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 K7EMT4 169 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 ICOSLGO75144 302 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 FKBP6O75344 327 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 RDH16O75452 317 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 CLDN11O75508 207 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 GABARAPO95166 117 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 EIF4EP06730 217 aaKnown RBP2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 POLR2MP0CAP2 368 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 TLX1NBP0CAT3 122 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 SMIM10L1P0DMW3 83 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 OR5H8P0DN80 308 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 GGT1P19440 569 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 GSTM3P21266 225 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 OTX1P32242 354 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 CYB561P49447 251 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 SP4Q02446 784 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 MECOMQ03112 1051 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 CAPRIN1Q14444 709 aaKnown RBP2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 PRPSAP1Q14558 356 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 RGNQ15493 299 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 ANKRD22Q5VYY1 191 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 CERS6Q6ZMG9 384 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 CMC1Q7Z7K0 106 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 SCD5Q86SK9 330 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 OTUD6BQ8N6M0 293 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 PQLC3Q8N755 202 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 OR10J6PQ8NGY7 276 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 OR52E5Q8NH55 327 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 LRRC29Q8WV35 223 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 SRSF12Q8WXF0 261 aaKnown RBP2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 DYNLL2Q96FJ2 89 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 SMIM10Q96HG1 83 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 BMFQ96LC9 184 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 SLC25A39Q9BZJ4 359 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 UCK2Q9BZX2 261 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 ACTR3CQ9C0K3 210 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 SLC40A1Q9NP59 571 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 ZDHHC4Q9NPG8 344 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 ACP6Q9NPH0 428 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 C20orf96Q9NUD7 363 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 LYARQ9NX58 379 aaKnown RBP2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 LGALS13Q9UHV8 139 aa2.49□□□□□ -2.01
HMGB1P17-201ENST00000403495 MTCL1Q9Y4B5 1905 aaKnown RBP2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 CAMTA1Q9Y6Y1 1673 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 IGLV1-36A0A0B4J1U3 117 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 INS-IGF2F8WCM5 200 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 SMKR1H3BMG3 65 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 GOLGA8TH3BQL2 631 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 AKR7A2O43488 359 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 CCNB2O95067 398 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 CD160O95971 181 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 SERPINE2P07093 398 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 ZDHHC11BP0C7U3 371 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 ZNF823P16415 610 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 CSNK2A2P19784 350 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 HMOX2P30519 316 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 FOXN2P32314 431 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 CEACAM3P40198 252 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 RPS9P46781 194 aaKnown RBP2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 STXBP1P61764 594 aaKnown RBP2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 TRAM2Q15035 370 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 SF3A2Q15428 464 aaKnown RBP2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 OR7A5Q15622 319 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 SNRNP35Q16560 246 aaKnown RBP2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 PIP5KL1Q5T9C9 394 aa2.48□□□□□ -2.01
HMGB1P17-201ENST00000403495 Q6P435 159 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms